Cynara cardunculus var. scolymus (artichoke): 112521651
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Entry
112521651 CDS
T05604
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP71
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112521651
03110 Chaperones and folding catalysts [BR:
ccav03110
]
112521651
Enzymes [BR:
ccav01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
112521651
Spliceosome [BR:
ccav03041
]
Complex C
Other components
PPlases
112521651
Chaperones and folding catalysts [BR:
ccav03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
112521651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
WDR55
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_Vps41
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
112521651
NCBI-ProteinID:
XP_024986401
LinkDB
All DBs
Position
LG 11:3845790..3852767
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AA seq
628 aa
AA seq
DB search
MEEAQNDNKDNNGSLVTVVDETDAQEEPMVGPGPAPVRRPKRPLQFEQAYLDSLPSANMY
EKSYMHRDVVTHVAVSAADFFITGSQDGHLKFWKKKGVGIEFAKHFRSHLGPIEGLAVSV
DGLLCCTISSDRSVKIYDVHNYDMMVMLRLPYTPGAVQWVYKQGAVKAKLAISDRNSPFV
HVYDARAGTNEPIISREIHMNPVKVMRYNHACDTVVTADTMGIIEYWDPTTLQFPESGVN
FKLKSDTDLFAIVKSKTAVSAIEVSADGKQFAITSPDRRIRIFWYRTGKLRRVYDESLEN
AQDLQRSDVPLYRLEAIDFGRRMAVEREIEKTENVPQPNALFDESSNFIIYPTLLGIKIV
NLHTNKVARILGKVENNDRFLRIALYQGDQSSKKVRKIPAAAANVNESKEPLTDPTLLCC
AFKKHRIYLFSRREPEEPEDATKGRDVFNEKPPPDELMAASDIGKSVTTSLPENVIMHTT
LGDIHMKLYPEECPKTVENFTTHCKNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG
REFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV
QAIEKVKTDKGDKPYQDVKILNVTVPKS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagctcagaatgacaacaaggataataatggaagtttggttacagttgttgac
gagaccgatgcgcaagaagagccaatggtgggaccgggacccgccccggtccgtcgccca
aagcgtccgcttcagtttgaacaggcctatctcgattctcttccatctgctaacatgtac
gagaaaagttacatgcatagagatgtagtaactcatgttgctgtttcagcagctgatttt
ttcatcacagggagtcaagatggacacttgaaattttggaagaaaaaaggtgttggcatt
gagtttgctaagcatttcagatcccaccttgggcctattgaagggctggcggtgagcgta
gatggtttgctttgctgtacgatttcaagtgatcggtctgtcaaaatatatgacgtgcat
aactatgacatgatggtcatgttacgccttccatatacacctggtgctgttcaatgggtt
tacaaacaaggggctgtcaaagccaagcttgctattagtgaccgtaactccccatttgtg
cacgtatatgatgcacgagctggaacaaatgaacccatcatttctagagaaatacatatg
aaccctgttaaagtaatgaggtacaaccatgcttgtgatactgtagtaaccgcagatacc
atgggaatcattgaatattgggatcctactacacttcaattccctgaaagcggggttaat
tttaaactgaaaagtgatactgatctatttgcaattgtcaaaagtaaaactgctgtttct
gctattgaggtaagtgcagatggtaagcaatttgcaatcacgtcacctgatcgtagaata
cgaatattttggtacaggacaggtaaactaagacgtgtctatgacgaatcactggagaat
gctcaagatcttcagaggagtgatgttcccttgtatcgactagaagcaatcgattttggg
agaagaatggcagttgaaagggaaattgaaaaaacagaaaatgtaccgcagccaaatgca
ctgtttgatgaaagctccaacttcattatttatccaacgctccttggtattaaaattgta
aatctgcacacaaacaaagttgccagaattctagggaaggtggaaaataacgatcggttt
ttaagaattgccttgtaccaaggtgatcagagcagcaaaaaagttcggaaaattcctgct
gctgctgcaaatgtcaacgaaagcaaagaacccctgacagatcctactttgttatgctgt
gctttcaaaaagcacagaatctatttgttcagtcggagagaaccagaggaacctgaggat
gcaaccaagggacgggatgtttttaatgaaaagcctcctccagatgaacttatggctgca
tcagatataggaaagtctgttacaacatcccttccagaaaacgtgattatgcacacaaca
cttggcgatatccacatgaagctgtacccagaagaatgtccaaaaactgtggagaacttt
accacacactgtaaaaatggctactatgataatctgatatttcatcgggttattaaaggt
tttatgatacagactggagaccccttgggagatggaaccggtgggcaatctatttgggga
agggagtttgaagatgaatttcacaaaagtttaagacacgacagacctttcactttgtca
atggcaaatgcgggcccaaacaccaatgggtctcagttctttatcacgactgtggctaca
ccatggctggacaataagcatactgttttcggcagagttataaagggcatggatgtcgtt
caggcaatcgagaaggtgaagacagacaagggagataaaccataccaagatgtaaaaatc
ttaaatgtgacggttccaaagtcatga
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