Cynara cardunculus var. scolymus (artichoke): 112521701
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Entry
112521701 CDS
T05604
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00040
Pentose and glucuronate interconversions
ccav01100
Metabolic pathways
Module
ccav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112521701
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112521701
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
112521701
NCBI-ProteinID:
XP_024986463
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Position
LG 11:complement(8695732..8703063)
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AA seq
391 aa
AA seq
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MALTPNSTFKGLRFDLWNLNSALHFHDCNGLRLKGTTHINSPKLHISINGCKDVDIRGVR
ILAPKDSPNTDGIDISDSTHVNIHHSNIQTGDDCVAINGGVYDVNVTRVFCGPGHGISIG
SLGEHGSHDTVEKVRVENCNISGTQNGLRIKTVPYGTGYARGIVFRKIHLVNVENPIIID
QHYCANTENAICPSPPSAPAVQVSDVRFDTQLNSVAVNGGVYDANVTRVFCGPGHGIGIS
IGSLGENRGRDIVEKVRVEDCNITGTTNGLRIKTVPYGRGYARGIIFRNINLINVKRPII
IDQHYCSNSNSEYAACRSPPSAPAIQVSDVRYENIYGSSATQRAIIFSCSKKYKCIGIQT
NRVVITGNNVFVVCKNVEGNFVDTTTPDTCR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggctttgactcctaattctacctttaaagggcttcgtttcgacctatggaatctcaat
tctgctttacattttcatgactgcaatggccttcggctgaaaggtacaacacacattaac
agcccgaagctgcatataagcattaacggttgcaaagatgtggatatcagaggtgttcgg
attttagcgccaaaagacagtcccaataccgatgggatcgacatcagtgattcaacccat
gttaatatccatcactccaatattcagaccggtgatgattgtgtggctattaatggtggt
gtctatgatgtgaatgtaaccagggtattctgtggacctggtcatggcataagtattgga
agcctcggggaacatggcagtcacgacacagttgagaaagtacgagtagaaaattgtaat
atctctggaacacagaacgggttacgtatcaagacagtaccgtatggaaccgggtacgca
agggggatagtgtttcggaaaattcatctggtaaatgttgagaatcctatcataattgat
caacattactgcgctaacactgaaaatgctatttgcccttcaccaccgtcagcaccagca
gtacaagtgagcgatgtgaggtttgatacacaattaaacagtgtggctgttaatggtggc
gtctatgatgcaaatgtaacgcgggtgttctgtggacctggtcatggcattggcataagt
atcggaagcctcggtgaaaaccgcggtcgcgatattgtcgaaaaagtacgagtagaagat
tgtaacatcacaggaacaacaaacgggttacgtatcaagacagtaccatatggaagaggg
tacgctagagggatcatattccgaaatattaatctcataaatgttaaaagacctatcata
attgatcaacattactgcagtaatagtaattctgaatatgctgcttgtcgttcaccgcct
tcggcaccagcaatacaagtgagcgatgtgaggtatgagaacatatacgggtcttcagca
acacagcgggcgattatttttagttgcagtaagaaatataagtgtatcggaatccaaaca
aacagagttgtaatcactggaaacaacgtttttgtcgtgtgcaaaaatgttgaaggaaat
tttgttgataccaccactccagatacatgcaggtag
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