Cynara cardunculus var. scolymus (artichoke): 112521832
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Entry
112521832 CDS
T05604
Name
(RefSeq) 30S ribosomal protein S1, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
112521832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ccav03011
]
112521832
Ribosome [BR:
ccav03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
112521832
Bacteria
112521832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
DUF3053
Motif
Other DBs
NCBI-GeneID:
112521832
NCBI-ProteinID:
XP_024986588
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All DBs
Position
LG_11
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AA seq
414 aa
AA seq
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MASLAQQIGGLRCPSLSTHLSRRSSYRNDSINHTVKRIQTTKAAAVVSNAQTRERMKLKE
MFEDAYERCRTAPYEGVAFTVDDFHNAIERFDYNSELGSKVRGTVFNVDANGAYVDITAK
SSAFLPVREACIHGIKHVQEAGIVPGMRDEYIIIGENEHDDSLILSLRQIQYDLAWERCR
QLQAEDVVLKGKVVGANKGGVVAIVEGLRGFIPFSQISSNSSAEELLEQEIPLKFVEVDE
EQSRLILSNRKARADSQAQLGIGSVVTGIVQSLKPYGAFIDIGGVNGLLHVSQISHDRVS
DIATVLQPGDTLKVMVLSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAMTFRQ
RIAQAEAMARADMLRFSPESELSLNSDGILGPLGSDLPPDGLDLNESPLPEGSS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccttggcacagcaaattggtggtctgagatgcccatctctatcaactcatcta
tcaagaagatcctcttacagaaatgatagtattaatcacacagtgaagagaattcaaaca
acgaaggctgctgctgttgtatctaacgcccagacgagagagagaatgaaactgaaagag
atgtttgaagatgcttacgagaggtgtcgcacggctccgtatgaaggtgttgcgtttact
gttgatgattttcacaatgccatcgagaggttcgactacaattctgaacttggatctaag
gtcagaggaactgttttcaatgtagacgcaaatggagcatatgttgacatcacagcaaag
tcctcagcattcttgccagttagggaggcttgtattcatggtataaagcatgtacaagag
gctggcatagtccccggtatgcgtgacgaatatattatcattggtgaaaacgaacatgat
gatagcttaatcttgagcttacgtcaaattcagtatgacctggcatgggagcgatgtcga
cagcttcaagctgaagatgttgttcttaagggtaaggttgttggtgccaacaaaggtgga
gttgtggcgattgtcgagggacttcgtggattcattccgttttcacaaatttcctcgaat
tcgagtgcagaagagcttcttgagcaggaaattccgttaaagtttgtggaggtagacgaa
gaacaatcaagactaattttgagtaatcgcaaggcgagggctgatagccaggcacagttg
ggaatcgggtctgttgtgactggtattgttcagagcctgaaaccgtatggtgctttcatt
gatatcggtggagtcaatgggcttctccatgttagtcagatcagccatgatcgtgtctct
gatatcgccaccgtccttcaacctggcgatactcttaaggtcatggtattgagccacgat
cgtgagagaggccgagttagtctatctactaagaaactggagccgactcctggagacatg
attcgcaaccctaagttggtttttgagaaggcggaggagatggctatgaccttcaggcag
agaattgctcaagcagaagccatggctcgtgctgacatgcttagattctcacctgagagt
gaactgagtttgaactcagatgggatattaggtccactcggctcggacctgcctccggat
ggtttggatttgaacgaaagccccctgcccgaaggttcatcataa
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