Cynara cardunculus var. scolymus (artichoke): 112521969
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Entry
112521969 CDS
T05604
Name
(RefSeq) vacuolar protein-sorting-associated protein 37 homolog 1-like
KO
K12185
ESCRT-I complex subunit VPS37
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112521969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112521969
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112521969
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
112521969
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112521969
Exosomal proteins of colorectal cancer cells
112521969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
GlutR_dimer
Mating_N
APG6_N
Cytochrom_B562
Motif
Other DBs
NCBI-GeneID:
112521969
NCBI-ProteinID:
XP_024986760
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Position
LG 11:complement(6375557..6382452)
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AA seq
193 aa
AA seq
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MFKPFWGSEEQVHAQAYGDRPVSRIPPGEAAGIVVVLKDKSASELQKLLSNKDAYQQFLL
SLDMVQTQIRLRDELRDETMQLAKHNLEKEPHIRELRNQCQIIRATELAAAREKLHELEK
QKQEILRFYSPASLLHRLQEAMHNTEEESEALHQQLLDREIDLTAFVQKYKRLRNSYHKR
ALTRLATNMSLAG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacccttctggggttctgaagaacaggttcacgcgcaggcatatggagataga
cctgtatcccgcattccacctggtgaggctgctgggattgtcgtcgtcttaaaagataaa
agtgctagtgagttgcagaagcttttgtccaacaaagatgcatatcaacaatttttactt
tctcttgacatggtccaaactcagattcgtctgagagatgaactgcgagatgaaactatg
cagcttgcaaaacacaacttggaaaaagaaccacacatcagggagctgcgaaaccagtgc
caaataatacgggccactgaactggctgctgcaagagagaagctccatgagctcgaaaag
cagaaacaagaaatcctcagattttactctcctgcatccttgcttcatcgtctgcaagag
gcaatgcataacacggaagaggaatcagaagctctccaccaacagcttctcgatcgagaa
attgatctgactgctttcgtgcaaaagtacaagaggctgcgaaattcgtaccataaacgc
gcccttacccgtctagcaaccaacatgtctttggctggttaa
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