Cynara cardunculus var. scolymus (artichoke): 112521986
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Entry
112521986 CDS
T05604
Name
(RefSeq) OTU domain-containing protein 5-B-like isoform X1
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112521986
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112521986
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112521986
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C85
112521986
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
112521986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA_9
Motif
Other DBs
NCBI-GeneID:
112521986
NCBI-ProteinID:
XP_024986784
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All DBs
Position
LG 11:4180376..4185959
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AA seq
519 aa
AA seq
DB search
MTRVFVQRGSATAGSSSSSNNTNRSSSSSSSSPPQVQVAPPQFLEAGEEVQEQVLCEDLP
LETVDRDRNDDIDAPISEKIEDETVMGSEDILKRIGGLRVNEEEEKKDGLKIDDYPSQTI
GGRPYPPPPPAPPPKPSSASSNSRRFVPGNSAGLRIGPSGRATAWPVVSTRTSPAGSRAS
SPRSHCENDGYNSADEQNSCYGSSYGDAVSSSRFCHYKELNNNQTNTERERQFEIDIRRT
KGYEVKRMLEDGNCLFRAVADQVYGDSEAYDLARQMCIDYMERERDHFSQFVTEGFTSYC
KRKRRDKVYGNNVEIQALCEMYNRPIHIYSYSTEPINIFHGSYNTDTPPIRLSYHHGNHY
NSLVDPRRLTIGAGLGFSCLQGTNVDKDKVKAAIKAQQDQQMDNALLWSDVELTEKEIER
MVMEASRAEYMANDKFKQQLGPRESSTSGAEPSSSGGTASGGESEGKVLCSSSSMQMVLS
MGFSYLQAMEAYSIFGDDVDSMVCYLLETSSRRKGKATE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtgtttttgttcaaagaggttctgctacagctggttcgtcttcatcgtcaaat
aatacaaacaggtcgagttcttcgtcttcttcgagtccaccgcaggttcaggttgctcct
ccacagtttctggaagcaggggaggaggttcaagaacaggttctttgtgaagatcttcct
ttagaaactgttgatcgtgatcgaaatgatgatattgatgcacccattagtgagaaaatt
gaggatgaaactgtcatgggttctgaagatattttgaaaagaattggtgggttgagggta
aatgaggaggaagaaaaaaaagatggattaaagattgatgattatccttctcagactatc
ggtggacgtccgtatcctcctccaccacctgctccaccaccgaaaccttcttcggcaagt
tctaattcccggagatttgtccctggaaactctgctggtttgcgaattggaccgtcggga
agagcaaccgcctggccggttgtttcaacaagaacatcgccggcaggatctcgagcttca
tctccaaggtctcattgcgaaaatgatggctacaatagtgctgatgaacaaaactcttgc
tatggatcttcttatggtgatgctgtgagttctagtcgtttttgtcactacaaagaactg
aataataatcagactaatacggaaagggaacgtcagttcgagattgatattagacggaca
aaaggttatgaagtgaaaagaatgctggaagatgggaattgcttgtttcgtgctgttgca
gatcaagtgtatggtgattcagaagcatatgatttggctaggcagatgtgcatagattac
atggaacgggagagagaccatttctcgcagtttgtaacagaaggtttcacttcttattgc
aagaggaagagacgggataaagtctacgggaataatgtggagattcaagcattgtgtgaa
atgtataatcggcctattcatatctattcgtatagcactgagcctatcaatatattccat
gggagctataatacagacacgcctcctatccggctaagttaccatcatggcaaccactac
aattctcttgttgatcctcgccgattgacaataggtgccgggcttggttttagctgcctg
caggggacgaacgttgataaagataaagttaaggcagcaatcaaagctcaacaagatcaa
cagatggataacgctcttctttggtcagatgtggagctaaccgagaaagaaatcgaacgt
atggtgatggaagcttcaagggctgaatatatggcaaatgataagttcaaacagcaactt
ggtccaagagaatcttcaacatctggtgctgaaccatcatcttctggaggcacagcatct
ggaggtgagagtgaaggaaaggtgctgtgcagcagtagcagtatgcagatggtgttgtca
atgggattcagctatttgcaggcaatggaggcttacagcatatttggtgatgatgttgat
tccatggtttgttatcttctggaaaccagcagcagacgcaaagggaaggccacagagtaa
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