Cynara cardunculus var. scolymus (artichoke): 112521998
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Entry
112521998 CDS
T05604
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112521998
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112521998
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112521998
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112521998
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112521998
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112521998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
FNIP_C
Motif
Other DBs
NCBI-GeneID:
112521998
NCBI-ProteinID:
XP_024986807
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All DBs
Position
LG 11:complement(608394..614440)
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AA seq
1021 aa
AA seq
DB search
MGKRVKKKSTRNAQKEKQFSTSSPKNVSQKIIPTMVVDGVSVVKEARVCPHLDTGVNLDK
ISSKIASLESLKCDDCREGVVDRRASKVKGKHGKKKASGSASESKSIWVCLECGHCTCGG
VGLPTTPQSHATRHAKQNHHPLAVQFANPNLRWCFTCNTLIPVQTSEENGGEQKDALSDI
VKLLKARSSSENSFNVEDVWFGSGDVTREMKSVSTQVISENSGGYMVKGLVNLGNTCFFN
SILQNLLAMDKLRDYFLRLEEPVGSLSVSLKKLFVETNPLTSAKNVINPQSLFNSVCAMA
PQFRGYQQQDSHELLRFLLDGICNEESGVQNSAPCSERESTVPKQTPTFVDAIFGGQTSS
SVSCLECGHTSIVYEPYLDLSLPLPAKKSPSKRMPSVSRSRKTKPPPKRRGKFGTKTNRA
SNASPADGVPIIATTSDYLPAEKKVVPSGDSTQPESAFLGGVGDKNVSAANENVAQGNAI
EKISEITIKESGIPSDNLALIEPATVLNSHGNRTVDSSDILSWLDYLEPTMVLSNHDAAA
CPGDDMVTEYTGKTQLVQDEPLLQQMMEASKQVYSLGLEETPPLADDSWLDYLQPSSSSN
GHIMASQNEDSSVVQNSGNNDDVFWENEQPLKVQESEIILLSYEELIPTSNGNEATLSSV
SYEQEPSDFDGFGGLFDEPEVVAGPTVGPLNGYVESGPMARNISESDSDEVDNTNSQVSV
DKCLTYFTTSELLKKTEHAWQCEQCSKALLEQRMRLKNKLHEPISNGAKHRIPSIPSVSN
GIGNPVEVSAVLGNSDENSWLHDKSDCSRLVCELEERGNVVNGGSPELSQHPSSITASSE
ESCIIQDTDSCQVNKHDNKCKNEKVEQRISNCLARRRDFNGVEDEEVNSSSVKVTRDASK
RILINRVPPILTIHLKRLSQDARGCLSKLNGHVDFKDTIDLKPYMDPSCCRDGGECRYRL
IGVVEHLGTMRGGHYVAYVRGGAKGNDDDCLWYHTSDAHVREVSLEEVLQCEAYILFYEE
M
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggggaagagagtaaagaagaaaagtacccgaaatgctcaaaaggagaaacagttttca
acctcttctcccaaaaatgtttcacaaaagataattccaacaatggtggttgatggagtt
tcggttgtgaaagaggcaagagtatgtccccatcttgatacgggcgttaatttggataaa
atctcctcgaagatagcatcactcgagtctcttaaatgtgatgattgtagggaaggggtg
gttgatagaagggcaagtaaagtaaaaggcaaacatggcaagaaaaaggccagtggttca
gcatctgagtccaaatccatttgggtgtgtttggaatgtggacattgtacatgtgggggt
gttgggcttcccacaacacctcaaagtcatgcaactcggcatgccaaacagaatcatcat
ccgttggctgtccaatttgcaaatcctaatctccggtggtgcttcacttgcaatacgctt
attcctgttcaaacttcagaagaaaatggaggagaacagaaagatgctttatctgacatt
gttaaattattaaaggctcggtcttcgtcagaaaactcctttaatgtggaggacgtttgg
tttggaagtggcgatgtcacgagggagatgaagtcagtaagtacccaagttatttcagaa
aacagtggtggctatatggtaaagggtttggttaatttagggaacacttgtttctttaat
tcaatattgcaaaatcttttagcaatggataaattgcgggattacttcttgagattggag
gaacctgttgggtctctctcagtttctttgaagaagctttttgttgaaactaatccatta
acaagtgcgaaaaatgtgatcaacccgcagtctctcttcaactctgtttgtgccatggct
cctcaatttaggggatatcaacagcaggatagtcatgagttgcttcgctttttgctggat
ggaatttgtaacgaggagtctggtgtacaaaactctgctccgtgttctgaaagggaaagc
actgttccaaaacagactcctacttttgtagatgccatatttgggggacaaacgtctagc
tctgttagttgtttggaatgtggtcatacttcaattgtatacgagccatatttagatctt
tcattaccattacccgccaagaaatctccatctaaaaggatgccatcagtttctcgatcc
aggaaaaccaaaccacctccaaagagacgtggaaagtttgggacaaaaactaatcgagct
tccaatgcctcaccagctgacggtgttccaatcattgcaaccactagtgattacttgcct
gctgaaaaaaaggttgttccttcaggtgattcaacacagccagaatctgccttccttggc
ggtgtgggtgataagaatgtttcagctgcaaatgaaaatgtagctcaagggaatgcaatt
gagaaaatctctgagattacaatcaaggaatcaggtattccttcagataatttggcactc
atagagccggccactgtgttgaatagccatggtaatcgaacagtggattcatctgatatt
ttatcatggttggattatctggagccaactatggtattaagtaatcatgatgcagctgca
tgccctggtgatgatatggttaccgagtacaccggcaagactcagctggttcaggatgag
ccattattgcagcagatgatggaagctagcaagcaggtttattcccttggtttggaggaa
acaccacccttggcagacgattcgtggttggactaccttcaacctagttcttcgtctaat
ggtcatattatggcatcacaaaacgaagactcgtcagtagttcaaaattctggaaacaat
gatgatgttttttgggaaaatgagcagcccttgaaagttcaagaatcagaaatcatattg
ctttcttacgaagaactcataccaaccagtaatggcaatgaggcgacattgtcttctgta
agttatgaacaagaaccttcggattttgatggctttgggggtctctttgatgaacctgag
gttgttgctgggccaactgtgggtcccttaaacggatatgtagaaagtggtcctatggcc
agaaacataagcgagtctgattctgatgaggttgacaataccaattctcaggtctctgtt
gataaatgtctaacttatttcacaacctctgagcttctcaagaaaaccgaacatgcctgg
cagtgtgagcaatgttcaaaagctttgttagagcagagaatgagactaaagaacaaactg
catgaacccatttcaaatggagccaaacatagaattccaagtattccatctgtctctaat
gggattggaaaccctgttgaagtaagtgctgtacttggtaattctgatgaaaattcttgg
ttgcatgataaaagtgattgcagtcgattagtatgtgagttagaagaaaggggaaatgtg
gtaaatggtgggagtccagaactatcacaacatccaagttcaattacagcatccagtgaa
gagagttgtattattcaagatactgattcttgtcaagtaaacaaacacgataataaatgt
aagaatgagaaagttgagcaaagaatatccaactgcctagctaggcgacgtgatttcaac
ggggttgaggatgaggaggtgaattctagtagtgtcaaggtgacgagggatgcatctaag
aggattcttatcaatagagttccaccaatcctgaccattcatttgaaaaggttaagtcaa
gatgctcgtggctgtttaagcaagttaaatggtcatgttgatttcaaagataccatcgat
cttaagccctacatggatcctagctgctgcagagatggaggggaatgcagataccggttg
ataggggtggtggagcatttagggacgatgaggggcggccactatgttgcatacgtgaga
ggaggtgcaaaaggtaacgatgatgattgcttatggtaccataccagtgatgctcatgtc
cgagaggtttctttggaggaagttctccagtgcgaggcctacatcttgttctatgaagaa
atgtaa
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