Cynara cardunculus var. scolymus (artichoke): 112522018
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Entry
112522018 CDS
T05604
Name
(RefSeq) ABC transporter G family member 20-like
KO
K05681
ATP-binding cassette, subfamily G (WHITE), member 2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
ccav04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112522018
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
112522018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112522018
04147 Exosome [BR:
ccav04147
]
112522018
04090 CD molecules [BR:
ccav04090
]
112522018
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
112522018
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of breast milk
112522018
CD molecules [BR:
ccav04090
]
Proteins
112522018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
AAA_29
ABC2_membrane_7
AAA_16
SMC_N
AAA_21
RsgA_GTPase
nSTAND_NTPase5
NACHT
nSTAND1
DUF87
AAA_22
MeaB
MMR_HSR1
AAA_28
nSTAND6
AAA_25
FtsK_SpoIIIE
SLFN-g3_helicase
RNA_helicase
AAA_23
NB-ARC
Motif
Other DBs
NCBI-GeneID:
112522018
NCBI-ProteinID:
XP_024986836
LinkDB
All DBs
Position
LG 11:5610578..5612758
Genome browser
AA seq
726 aa
AA seq
DB search
MSFDTMSTGSDLPFLGPRSGPKSMELQQLSRQPKHHVSSTLGELLQLMGDANSPPNGGRH
GRSESIHSCPFVLSFNSLTYSVKIPRKMSFSNSLGGTKVEVSNTKVLLDDISGEAREGEI
MAVLGASGSGKSTLIDALANRIAKGSLKGTVTMNGEILESKLLKVISAYVMQDDLLFPML
TVEETLMFSAEFRLPRTLSKSKKRARVQALIDQLGLRNAAKTVIGDEGHRGISGGERRRV
SIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQTGSIVIMSIHQPSYRIMSLLD
KLIFLSRGQMVFSDTPSKLPDFFSEFGSPIPENEDRTEFALDFIRELEISGAGTKTLIDF
YKSWSRNKTHESRLVQEPKLSLEDAISASISRGKLVSGATNMDSSNLSSSVPTFANPFWV
EVLVITKRSMLNSWRSPELYAIRLGAIIVTGTILATMFRKLDNSPRGIQERIGFFAFAMS
TMFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVISHSLMSIPSLIFLSFVFACITFWA
VGLAGGTTGFFTFLFFIFASFWVGSSFVTFLSGVVAHVMLGYTVVVAVLAYFLLFSGFFI
TRDRIPSYWLWFHYMSLVKYPYQGVLQNEFDDPTKCFVRGTQIFDNSPLGAIPDAMKVKL
LKSMSQTLGVKLTSSTCLTNGADILKQQGVTDINKWGCFWITIALGFFFRILFYLALLVG
SKNKRR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgacaccatgtccacaggaagtgacctgccttttttaggcccacgctctggt
cctaaaagcatggagctccaacaactatcacgccaaccaaaacaccatgtctcatcaacg
cttggagagcttctgcaactgatgggggacgccaactctccacccaacggcggccgccat
ggccgatctgaatcgattcactcttgcccttttgttctttctttcaatagcctcacgtat
agtgttaaaattcctcgaaagatgtcgttttctaattctcttggtggtactaaggtggag
gtatccaacaccaaggttttgttggatgatatctccggtgaggctagagaaggcgagatc
atggcagtgcttggtgctagtgggtccggtaagtcgacgttgatcgatgcactcgcgaac
cggatcgcgaaagggagtttgaaaggtacggtgacgatgaacggcgagattctggagtcg
aagttgctgaaagtgatatcggcgtacgtcatgcaagatgatttactgtttccgatgcta
accgtggaagaaaccctaatgttctcggcggagttcaggctgcctcggaccctttcgaag
tcgaaaaagagagcaagagttcaagcactgattgatcaattaggtctccgaaatgctgcc
aaaacggtcattggagatgaaggtcatagagggatttccggtggggaacgccgtcgtgtt
tccatcggaatcgacatcatccatgaccccatcgtactgtttcttgatgaacccacatct
gggctcgattccactagtgctttcatggtggtaaaagtcttgcaaagaatagctcaaact
ggaagtattgttatcatgtccattcaccaacctagttatagaatcatgagtttgcttgat
aaattgatctttctttcaagaggacaaatggtgtttagtgataccccatcaaaactacca
gatttcttctccgaatttggaagcccgatcccagaaaatgaagatcgaaccgaattcgcc
ctcgacttcatccgtgagctcgaaatatcgggtgcaggaaccaaaaccctaatcgatttc
tacaaatcatggtcaagaaacaagacccacgaatcaagattggttcaagaaccaaaatta
tcactggaagacgccattagtgcaagcatttctagaggcaaactagtttcaggtgctaca
aacatggattcatcaaatctatcttcttcagttccaacatttgcaaaccctttctgggtc
gaggttctcgtgatcacgaaacgttcgatgctcaattcatggcgatctcccgaactatac
gccatccgactaggagccatcatcgtcaccggaaccattctcgcaaccatgtttcgaaaa
ctcgacaattcgccacgaggaatccaagaacgaatagggttcttcgctttcgccatgtcc
accatgttctacacctgcgcagaagcaattccggtattcctccaagaacgatatatattc
atgagagaaactgcatacaacgcttatagacgttcatcctacgttatctctcattcactc
atgtcaattccttctttaatctttctctcattcgttttcgcctgcataaccttctgggcc
gtcggcttagccggcggaaccaccgggtttttcacgttcctcttcttcatcttcgcctct
ttttgggtcggaagctccttcgtcaccttcctctccggcgtggtggctcacgtgatgctc
ggatacacagtcgtcgtcgccgttctagcttatttccttcttttcagcggcttcttcatt
actcgtgatcgaattccttcatattggctatggttccattatatgtcgctagttaagtac
ccatatcagggcgttctgcaaaacgagtttgatgatcctacaaaatgcttcgtgaggggg
actcagatctttgataactcgccattaggtgcaattccagacgccatgaaagtgaagctt
ttgaagagcatgagtcagacacttggtgtgaagcttacgagctcgacttgcttgacaaat
ggagcagatatcttgaagcaacaaggtgttacggatattaacaaatggggttgcttttgg
atcaccatcgcattgggtttcttcttcagaatcttgttttatttggctttattggtggga
agcaagaacaaaaggaggtaa
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integrated database retrieval system
