Cynara cardunculus var. scolymus (artichoke): 112522034
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Entry
112522034 CDS
T05604
Name
(RefSeq) pentatricopeptide repeat-containing protein At4g01400, mitochondrial
KO
K20291
conserved oligomeric Golgi complex subunit 4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112522034
Membrane trafficking [BR:
ccav04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
112522034
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR_1
PPR
PPR_3
PPR_long
ECSIT_N
Motif
Other DBs
NCBI-GeneID:
112522034
NCBI-ProteinID:
XP_024986862
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Position
LG 11:7632090..7633755
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AA seq
484 aa
AA seq
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MKVALIQPNHSTSTKQTLIYMMPSFLSHFSKIVNCSVQTLKPVVFFHSSPTLLLNHNQIP
TGVPSPSRIQKLIASQSDPLVAKEIFDLASNAYPGFHHSYATFQTLILKLGRSHHFSLMN
SLLSCLKSDHRYTVTPSLFTHIIRIYGDANLPDKALKTFYTILEFNIKPRAKQLNVILEI
LVSQRNYLHPAFDLFKSAYQYDVSPNVESYNILMHAFCLNGDLSIAYNLFNQMLKRDVVP
NVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDSLTYTTLLNSLCRKKKLREAYKLL
CRMKVKGCNPDIIHYNTVILGFCRENRAHDACKVLEDMPSNGCLPNLVSYRTLVGGLCSQ
GLYDEAKTYLGIMVSKGFSPHASIWHGLIGGLCNIGKIDVACSVLDGMLKSGEAPPLYTW
MEVVNRVCVVETEPERLEEVLKVEIEAHTRIVEAGFDLQEWLVKKARANGKFRSGREKVR
WGLH
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggctttaatccaaccaaatcattcaacatctaccaaacaaactcttatctat
atgatgccatcttttctttctcatttcagcaagattgtcaattgctctgttcaaacccta
aaacctgtggtgttcttccattcctctccaacccttttgttgaatcataatcaaatacca
actggggttccatctccatctcgaatccagaaactcatagcttcccaatcagacccactt
gtagctaaagagattttcgatttagcttccaatgcatatccaggttttcaccattcctac
gcaacattccagactctcatccttaaactcggccggtcccaccatttttccctcatgaat
tcccttctgtcctgcctcaaatctgatcatcggtacactgtcacgccttccctcttcact
catatcattcgcatatatggggatgcaaatttgcctgataaagctctcaagacattctac
acgatccttgaattcaacatcaaaccacgagcgaagcaactgaatgtaattcttgagatc
ctagtgtcacaacggaactatctccaccctgcttttgacttatttaagtccgcttatcag
tatgatgtttctcccaatgtcgaatcgtataacattttgatgcatgctttttgtttgaat
ggcgatcttagtattgcatacaacctgttcaatcaaatgctcaagagagacgttgttcca
aatgttgagtcttaccggattctgatgcagggtttgtgtcgaaaaagtcaggtaaatagg
gccgtggacttgttagaggatatgttgaacaaagggtttgtacccgattctttaacttac
acgactctattgaacagtttatgtagaaaaaagaagcttagggaggcttataagcttcta
tgtaggatgaaggtcaaaggatgcaatcccgatatcattcactataataccgttatttta
gggttttgtagggaaaatcgtgcacacgatgcttgtaaggtgctcgaggatatgccttca
aatggttgtttaccgaatttggtgtcttatcgcactttagttggtggcttatgcagtcag
ggtttgtatgacgaggctaaaacttatttgggtataatggtgtcaaaagggttttctcct
catgcgtcgatatggcatggcttgatcggtgggttatgcaatatcgggaagattgatgta
gcgtgttcggttttggatggaatgctgaagagtggggaagctccgcctctttatacttgg
atggaggtagttaatagggtttgtgtggtggagactgaacccgaacgattagaagaagta
ttgaaggttgagatagaggctcatacacgaatagtggaggccggtttcgatttacaagaa
tggttagtcaagaaggctcgagcaaatggcaagtttagatcgggaagggaaaaggtcaga
tggggtttgcattga
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