Cynara cardunculus var. scolymus (artichoke): 112522068
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Entry
112522068 CDS
T05604
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112522068
04121 Ubiquitin system [BR:
ccav04121
]
112522068
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112522068
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112522068
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112522068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
Zf_IFT144_1st
zf-C3HC4_3
zf-RING_5
zf-HC5HC2H
K_channel_TID
DUF6757
Motif
Other DBs
NCBI-GeneID:
112522068
NCBI-ProteinID:
XP_024986906
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Position
LG_11
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AA seq
417 aa
AA seq
DB search
MDEGSDSTRYWCHECSRVVETIAEAETIKCSLCNGGFVEELDSARSDNHNHHHAGDSESD
RALSLWAPILLGMMSNPRRRRRFRQIENDENDENEDRNDSEERYRRYHREGGESELDREL
ESIMRRRRRSSATILQLLQGIRAGMITESENNADREGGENNRERERERERERERVILINP
FNQTIIVQGGVGGGGGSGNPFDSGGPSQNHPIGSLGDYFVGPGLELLLQHLAENDPNRYG
TPPAQKEAVEAMPTVIIEENSIQCSICLDDVEVGAEAKEMPCKHRFHGECILPWLELHSS
CPVCRYQLPSDESKLERDREASQGIMVNTNAITGESENGGNGEEGEDEGRNTRRFSVALP
WPFSSLFSSTSGTQITNSNPQLIMNLSTSLGSGSGSGSGTAGQEGGEGGRREDDDLM
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagggagcgattcaacgagatactggtgtcatgaatgttctagggtagttgaa
actatcgcggaggcggagacgatcaagtgttccttatgtaacggcggattcgtggaggaa
ttggacagcgcaaggagtgataatcacaatcatcaccatgccggagattctgaatctgat
cgtgctctctcgttgtgggctccgattttgctcggtatgatgagcaatcctcgccgtcgc
cggagattcagacagattgagaatgatgaaaacgatgagaatgaagatcgtaacgattct
gaagaacggtatcgtcgttatcaccgtgaaggaggagagtcggaattggatagggaactt
gaatctatcatgaggaggaggaggcggagctccgccaccatcctccagctccttcaggga
attcgagccggaatgataactgaatcggagaacaatgccgatagggaaggtggagagaat
aacagagaaagagaaagagaacgagaacgagagcgagagcgtgttattctcatcaatcct
tttaatcagacgattattgttcaaggcggtgttggcggtggtggtggcagcggcaatccg
tttgattccggtggcccatcgcagaaccacccgatcggatctttaggcgattatttcgtg
ggtccaggtctcgaattactcctgcagcatttggcggagaacgacccgaaccgatacggg
acaccaccggcgcagaaagaggcggtggaggcaatgccgacggtgatcatcgaggagaat
tcgatccagtgttcgatttgtttggatgatgtagaggtcggagctgaagcgaaagaaatg
ccatgtaaacacaggtttcatggggaatgtatcctgccatggctagagcttcatagttca
tgtccagtttgcaggtatcaattgccttccgatgagtcaaagctcgaacgcgatcgagaa
gcttcccaaggcatcatggttaacaccaacgcgatcacgggggaatccgagaacggtgga
aacggcgaagaaggtgaagatgaagggagaaacacaaggcggttttccgttgctctcccg
tggccctttagcagcttgttttcgtcaacatccggaacccaaatcacgaactcgaaccca
cagttgataatgaacctatcaacttcattggggtcagggtcggggtcgggatcggggacg
gcgggtcaggaaggtggcgagggtggtcggagggaagatgatgacttgatgtaa
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