Cynara cardunculus var. scolymus (artichoke): 112522074
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Entry
112522074 CDS
T05604
Name
(RefSeq) serine--tRNA ligase-like
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112522074
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccav01007
]
112522074
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112522074
Enzymes [BR:
ccav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
112522074
Amino acid related enzymes [BR:
ccav01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112522074
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112522074
Prokaryotic type
112522074
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
112522074
NCBI-ProteinID:
XP_024986911
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All DBs
Position
LG 11:complement(13027833..13032119)
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AA seq
248 aa
AA seq
DB search
MRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHIDDWIHPTQLPLRYAGY
SSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWEMHEEMIKNSEEFYQMLKL
PYHIVSIVSGALNDAAAKKYDLEAWFPASSTYRELVSCSNCTDYQSRKLEIRFGQKKSNE
QMKQYCHLLNSTLTATERTMCCILENYQREDGVEIPEVLQPFMGGKTFMPFQAPPPTKET
TKGKKSKA
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagatataatgggaaaatgcgctcaattagcacaatttgatgaagaactgtac
aaggtaacaggcgagggagatgacaagtatctgattgccactgcggaacaaccactttgt
gcctatcacatagatgattggattcatccaacacagctccccttaagatatgctggatat
tcgtcttgcttccgtaaagaggctggttcacatggccgagacactcttggtattttccgt
gttcatcagtttgagaaggttgaacagttctgcattaccagcccaaatggcaatgattct
tgggaaatgcatgaggagatgatcaaaaactcagaggaattctatcagatgttgaaattg
ccatatcatatagtgtctatagtttctggtgcgctaaatgatgctgcggcaaagaagtac
gacttggaagcatggtttcccgcatccagcacttacagagaacttgtgtcttgttcaaac
tgcacggattaccaatcaagaaaattggagatcaggtttggacaaaagaagagcaatgaa
caaatgaagcaatactgccatctattgaattccacactgacagcaacagagaggaccatg
tgctgcattcttgagaactaccaaagggaagatggtgtggaaataccagaagtactacag
ccatttatgggtggaaagacgtttatgcccttccaagccccacctccaaccaaagaaaca
acaaaagggaagaaatcaaaagcatag
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