Cynara cardunculus var. scolymus (artichoke): 112522105
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Entry
112522105 CDS
T05604
Name
(RefSeq) nuclear transcription factor Y subunit A-10
KO
K08064
nuclear transcription factor Y, alpha
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112522105
Transcription factors [BR:
ccav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
112522105
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
112522105
NCBI-ProteinID:
XP_024986952
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Position
LG 11:5090688..5093731
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AA seq
322 aa
AA seq
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MNSVYYKEHYDGIASNPVGSLSSGSGPWWSGLVTRPTYEESMVRMKPSSMEDIGEQLMPI
ISPKPMAKGNMTHFNIFSGECKSSSNGQKPVQIQAAFSMQYAPQEYGGHLELGFGPPPVI
CGKNPYGGQYYGVLSGFGPQSTGRVMLPLNLSSDDGPIYVNAKQYHGIIRRRRSRAKAEM
AKKVSKSRKPFLHLSRHLHAKRRPRGCGGRFLNTKEMDKGKSGNPDSKTEHPTGSQRSEV
LQCDLGNSTSPHETNAGRSHISGSEVTSMFSMGDLNHFPIGNLSVVSLSDMMMSGNGIHA
FGMHNKWAAATTGGGNCCNLAV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgtgtattacaaagaacattatgatggaattgcttcaaatcctgtgggttca
ctgtcatctggttcgggtccttggtggagtggacttgtgacccgacccacttatgaagaa
tcaatggtcagaatgaagccttcatcaatggaagacattggagaacaactcatgcctatt
atttcccctaaacccatggctaaagggaatatgactcatttcaatatcttttctggtgag
tgcaagagttcatcaaatggccaaaaaccagtgcaaattcaggctgctttctctatgcaa
tatgctccacaggagtatggaggtcatcttgagctaggatttggtccgccacctgtgatc
tgtggcaagaatccttacgggggtcaatattatggcgttctctctggttttggacctcaa
agcacaggccgggttatgctgcctttgaacttgagcagtgatgatggacctatatacgtg
aatgcaaagcagtatcacggaataatcaggcgccggcgatcccgagccaaggcagaaatg
gcaaaaaaagtttcgaagagtcgtaagccatttctgcacctgtcacgccatctccatgca
aagcgccggccaagaggttgtggaggccgcttcctgaacacaaaagaaatggacaagggt
aaatctggaaatccggattcaaagaccgagcatccaaccgggtcccagagatccgaggtt
ctgcagtgtgatctcggcaactcgacctcccctcacgaaacaaacgctggtaggtcccac
atatcgggatcggaggtaacaagcatgttctccatgggagacctcaatcacttccccatc
gggaatctctcggtcgtttctctttcagacatgatgatgtctggaaacggcattcatgcc
tttggcatgcataacaaatgggctgcagcaactaccggtggtggtaactgctgcaacctg
gcagtctaa
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