Cynara cardunculus var. scolymus (artichoke): 112522232
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Entry
112522232 CDS
T05604
Name
(RefSeq) coronatine-insensitive protein 1-like
KO
K13463
coronatine-insensitive protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112522232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112522232
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112522232
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box
Motif
Other DBs
NCBI-GeneID:
112522232
NCBI-ProteinID:
XP_024987101
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Position
LG 11:complement(815921..818167)
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AA seq
579 aa
AA seq
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MEEDLKDCRVENESTDTVFNCVVPYIHDGRDRNSFSLVCRKWSELDGTTRKHVTVHMCYS
TTPFRLRQRFPLLESLTLKGKPRAAMWDLVPEDWGGYVTPWVREISSSFNCLKSIHFRRM
IVRDSDLELLSRTRGKELRVLKIDVCSGFSTDGLLHIGRYCNNLKILYLQESLIVEKDGK
WLHELALHNTCIESLNFYMTDLVKFDFKDLEIIARTCSESLVSVKISECELMDLVDFFSH
AIKLQDFGGGAFSDQPEKYAGFKFPQKLHSVALNYMSQSEIPIVIPFAHQLTELDLLYSL
FDTEDHCFLIQRCPNLKVLYARDAIGDIGLQIVGQFCKKLRRIKIERGADEEGLVSHRGL
ISLAQGCLELECLHVNVTDISNEAMECIGSHLKNLYDFRIVLLDKLEKIPDLPLDNGIRS
LLSGCTKLGRLCVYLRRGGLTDVGLGYIGKYGQNVRYLLLGFTGESDAGLVELSKGCPNL
QKLEMRGCAFSEQALASFVFNVGSLRYLWVQGYRASASGRDILAMARPFWNMELIRSVGD
APESSFQQQPPSLLAYYSLAGQRTDFPDSVLPLHPSLDL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggatctcaaggattgtcgtgtggaaaatgaatcaaccgacacggtgttcaat
tgtgttgtaccgtacattcacgacggccgtgaccggaattccttttctctggtttgccgg
aaatggtctgagctcgatggtacgactcggaagcatgtaaccgttcacatgtgttactcc
actacaccgtttcgtctccggcaacgcttcccgcttctcgagtcgctaaccctaaaggga
aagcctcgagctgccatgtgggatttagtcccagaggattggggtggttacgtcactcca
tgggttcgggaaatctctagttcattcaattgcttaaagtcgattcatttccggcgaatg
attgttcgtgattcggatctagaactcttgtcccggactcggggtaaggagcttagggtt
ttgaaaattgatgtctgctctgggttttccacagatggattattgcacatcggtaggtac
tgtaataatttaaaaattttgtatttacaagaaagcttgattgttgagaaagatgggaaa
tggttacacgaattggctctccataacacctgcatcgaatcattgaatttctatatgacg
gatcttgttaagtttgatttcaaagatcttgaaatcattgccagaacttgtagtgaatct
ttagtgtctgttaagattagcgaatgtgaacttatggatcttgtagatttctttagccat
gccatcaagctacaagatttcggtggtggtgcattcagtgatcaaccagagaaatacgcc
ggtttcaagtttcctcagaaactgcattcggtggcattgaattacatgagtcaatccgaa
attccgattgttatccctttcgcgcatcagctaaccgaattagatcttctatattcactg
tttgatacagaagaccattgtttcttgattcagaggtgtcccaatttgaaagttctgtat
gccagagatgccataggggacataggattgcaaatcgtaggtcagttttgcaagaaattg
cgcagaatcaagatcgaaagaggagccgatgaagaagggttggtttcacacaggggactg
atttctctagcacaaggatgtcttgaattggaatgtttacatgttaatgtcacagatatt
tcaaatgaagccatggaatgtatcgggtctcacttgaaaaacctctatgattttcgaata
gttttgcttgacaaactagaaaagataccagatttacctttagacaatgggattcgatcc
ctgctaagtggttgcaccaaactcggacgactatgtgtctacctccggcgtggtggatta
acggatgtgggtttggggtatattgggaaatatggtcaaaatgtgagatatttgcttctt
gggtttacaggagaatctgatgcagggcttgtggagttatcaaaagggtgtccaaatttg
caaaaactggaaatgaggggttgtgcgtttagcgagcaagcgctggctagctttgtgttc
aatgtgggttcattgaggtacttgtgggttcaaggatatcgtgcatctgcaagtggtcgt
gacattttggcaatggctcgtccgttttggaatatggagttgattcgatctgttggtgat
gcacccgagagttcgtttcaacaacaaccgccttctttgcttgcgtattactcgcttgct
ggacaacgaacggatttcccagatagtgttcttcctttgcacccttctttagatctttaa
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