Cynara cardunculus var. scolymus (artichoke): 112522300
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Entry
112522300 CDS
T05604
Name
(RefSeq) transcription factor MYB3R-1 isoform X1
KO
K09420
transcriptional activator Myb
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112522300
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
112522300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
112522300
NCBI-ProteinID:
XP_024987197
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All DBs
Position
LG 11:complement(20009705..20019031)
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AA seq
966 aa
AA seq
DB search
MESDLTMTVSSDGLSKGLQKMRSLNGRTSGPTRRSTKGQWTAEEDETLCKAVQQFNGKNW
KKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEVIVRLVEQYGAKKWSTIAQHLP
GRIGKQCRERWHNHLNPNINKEAWSQEEELALINAHQIYGNKWAELTKFLPGRSDNAIKN
HWNSSVKKKLDSYLASGLLAQSQGLPRFSHTNQSTASTSSWVQQYSGDDSIPKDITETED
VSDCSQGSTFGGCSKATMANAIAGYAQNESQSAENSNQDLGSYPSSGLPCELSDSSKMVE
QCFSHDWVTSDKDWQISSNELQKIPSLDLSEDSEFINCIDVDQNHEVAPYPTQSSVNFGA
STSIGNLVVASDVAEHMLMSEDDCSRVIYPPDGSTLSYASENLYKCPNSNEDGSADSLIY
QPSNGEVPNDSNINSQSYYSDLLGTPCYQSICMPLQPPSGQGTNNFNSESNQFNGPSINN
QELPVHAHNGLPYANDSSNTDFCNSQDIVGSQNHRDQVNDSLEVVPTDAFSLAQLQSDPS
VDQVHVSETEQHDTGVLSYDPPRFPSLDIPFFSCDLVQYGGEMQHEYSPLGIRKLMMSSG
NCFSPYRLWDSPSRADSPEAVLKSAAKTFTGTPSILKKRNRDLCSPLSEKRCEKKLERTS
FSNLARDFSRLEVMFDDSKSQESPSFSHKEDYGPFVEDKENVIPATEGREKDGGNSTITK
SCQVQQSSGVLTERNLDNLSFFSPDKFTTKADTPKGPNAKISGKTSSSSSEVVPDHVTAM
ASSCDNPCQSLVSPHTVSGKKAGSCLVASMHSAPNTVEKSGNDASVETFGLFGETPFKRS
FDSPSAWKSPWFSFLPGPRVDTDITIEDIGYFVSPRERSYDALGLMKQLSEHTAPAYANA
QEVLGDETPDSILKKRYEEKGERSRQESNLLTERRVLDFSECGSPSKGTEGASFSSPSSY
LLKGCR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgatttgacaatgacggtatcttctgatggcctcagcaaaggacttcagaaa
atgcgatctctaaatgggaggacaagtggtcctacaaggcgttcgacaaaggggcagtgg
actgcagaagaggatgaaacgttatgtaaagctgttcagcaattcaatggcaagaactgg
aaaaaaatagcggagtgtttcaaggatcgaactgatgtccagtgcttgcatcggtggcag
aaagttttgaacccagagcttgttaaaggtccatggtcgaaagaggaggatgaagtaata
gttcgtctagtggagcaatatggagccaaaaaatggtccaccattgcacaacaccttcct
ggtcgcattggtaagcagtgtcgggagaggtggcataatcatctgaatcctaacataaac
aaggaggcttggagtcaggaagaggagttagcgctgattaacgcccatcaaatctatggg
aataagtgggcggagttaacgaaattcttgcctgggcggtcagacaatgctattaagaat
cattggaacagttctgttaagaagaaattggactcctacttggcatcaggcttgcttgca
cagtcccaagggttgcctcgtttcagccatacgaatcaatcaactgcttctacttcctca
tgggtgcaacagtatagtggagatgatagcattcccaaagatattacagagaccgaggat
gtctcagattgcagtcaaggttcaacttttgggggatgttcaaaagccactatggcaaat
gcaattgctggatatgctcaaaatgaaagccaatcagctgaaaattctaatcaagatctt
ggctcttatccaagttcaggtttgccttgcgaattgtctgattcttccaagatggtcgaa
caatgtttctcacatgattgggtaacttcagataaagattggcagatttcttccaacgag
ttacaaaagatcccttcactagatttgagtgaggactcagaattcataaactgtatagat
gttgatcagaaccatgaagtggcaccctatccaactcaaagttctgtcaattttggcgct
tctacttcaattggcaacctggttgttgcttctgatgtggcagagcatatgttgatgtct
gaagatgactgttccagggtgatatacccacctgatggatctaccttgtcctatgcctct
gaaaatttgtacaagtgtccaaatagcaacgaagatggatctgcagactcgttaatttat
cagccatcaaacggtgaagttcctaatgatagtaatataaattcacaatcatattattca
gatttgctgggaactccatgttatcagtctatatgcatgcctttacaaccaccatctggt
caaggtacaaataacttcaatagtgaatccaatcagtttaatggtccttcaatcaacaat
caagaactccctgtgcacgcccataatggacttccttacgcgaatgattctagcaatact
gatttttgcaatagtcaagatattgtggggtcacaaaatcatagagatcaagttaacgat
tctttggaggtagtacctacagatgcgtttagtttagcacaactccaaagtgatccgtca
gttgatcaagttcatgtttcagaaaccgagcagcacgatacaggagttttatcttatgat
cctcctcgattcccaagcttggacatcccattctttagctgtgatctagtacaatatggt
ggtgaaatgcagcatgaatatagtcctcttggtattcggaagctgatgatgtcatctggg
aactgttttagtccatacagattgtgggactcaccttcacgagcagacagcccagaggct
gtgctgaaaagtgctgccaagactttcacaggcacaccatctatattaaagaagagaaat
cgtgatttgtgttcacctttgtctgagaaaagatgtgaaaagaagttagagcgcacctct
ttctccaacttggctagagacttctctaggttggaggttatgtttgatgacagtaagagc
caagagtcaccatcatttagtcacaaggaggattatggaccatttgttgaagataaagaa
aatgtgatacctgctactgaagggagggaaaaggacggtggaaacagcacaataacgaaa
tcttgtcaggtgcaacagtcatctggagttcttacggaacggaacttggataatctgtca
ttcttttctcctgataaatttaccaccaaagcagatacacccaagggtccaaatgctaaa
atatctggaaaaacaagctccagtagttcagaagttgtgccagatcatgttactgccatg
gcatcttcttgtgataatccgtgtcaatcccttgtcagccctcatactgtttccgggaag
aaggctggaagttgccttgttgcatccatgcactctgctcctaatactgttgaaaaatct
gggaatgatgcttcagtcgaaacctttggcttatttggtgaaactcccttcaagagaagc
tttgattctccttctgcatggaaatccccttggttctcatttctgcctggcccacgggtt
gatacagatataacaattgaggatattggttactttgtgagcccaagggaaagaagctat
gatgctcttgggttaatgaaacagttaagtgagcatactgctcctgcatatgcaaatgct
caggaggtcttgggagatgaaactcctgattccatacttaagaagagatatgaagagaag
ggggaaaggagtcggcaagaatcaaatctcttgacagagagaagggtgctggatttcagt
gaatgtggaagtcccagcaaaggaacggagggtgcaagtttctcgagtccgtcttcctat
ctgttgaagggttgcaggtaa
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