Cynara cardunculus var. scolymus (artichoke): 112522369
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Entry
112522369 CDS
T05604
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04016
MAPK signaling pathway - plant
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
112522369
04075 Plant hormone signal transduction
112522369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112522369
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112522369
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GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
LUC7
PRP1_N
bHLH_INO4
Motif
Other DBs
NCBI-GeneID:
112522369
NCBI-ProteinID:
XP_024987228
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All DBs
Position
LG 12:6787072..6788694
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AA seq
513 aa
AA seq
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MDDLIVSPSSSSSIVSFPKTTIPPPSDHTLQQKLQHLLQSQPQPWAYAIFWQTFNDDSNG
CVSLSWGDGHLQSNNDLPITTLPSTSGGSATFLSDLEPDSRKSLIREIQALLGPDNRADA
EWFYVISLTRSFTPGDGSVPGTAFGSNTLIWLSGVDQLRSFNCERAKEARIHGLETLVCI
PTPNGVLEIGSHHVIEESWNLAHQAQSVFGGVSSSLNNLNDDHHNIISFADMMFMAGGLQ
EEGMNTIDFESTTPDNQMSKNVEKLYINKSNTTAATTMNTYAETASEHSDSDCQLVLATT
ERRIQKKKGKKPGGRDPPVNHVEAERQRREKLNQRFYALRSVVPNVSRMDKASLLADAVC
YINELKAKVEYLESQLHSRINHQGKTKKMKVEVADTADNPLQTSDTYSLYQSRVSTKPIL
KINNKATIKNNISGFGEVEVKIVGEDAMIRVQSGNANLPPAKLMDALREMKAQIQHASMS
CVNEIMLQDVVVRIPGAIDEDELKTDLIRRLDR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcttattgtctccccatcttcatcttcttccatcgtttcttttcccaaaact
acaatccctcccccttctgatcataccctacagcaaaagctccaacacctccttcaaagc
cagcctcaaccatgggcatacgccattttctggcagaccttcaacgacgactccaatggc
tgtgtctccttgtcctggggagacggtcatctccaaagcaacaacgaccttccaatcacc
accttgccctcgacctctgggggttccgccacctttctctccgatttggaacctgacagc
aggaagtctttaatcagagaaatccaggccctccttggaccagacaaccgcgccgacgcc
gaatggttctatgtcatctctttaaccaggtcatttacccccggagacggatcggttcca
ggtacggctttyggttcaaacactttgatctggttaagtggggtggatcagctccgttct
tttaactgtgagagagctaaagaagctcggatccacgggctagagaccctggtttgcatc
ccgacaccaaatggtgttttagaaataggttcacatcatgtcatcgaggagtcgtggaat
ttggctcatcaggctcagtcagtctttggtggggtttcttcttctttgaacaaccttaat
gacgatcatcacaatattatttcttttgctgatatgatgtttatggctggcgggctgcaa
gaggagggtatgaacacgatagattttgaatcaacaacacccgataaccagatgtccaag
aacgttgaaaaattatacataaacaagagcaacactactgctgctacgaccatgaatacc
tatgcggaaactgcatcggagcattccgattctgactgccagctggttcttgccacgaca
gagaggcggatacagaagaaaaaaggaaagaagccaggtggtcgggatcctcctgttaac
cacgtggaggcagaaaggcaacggcgtgagaagctcaaccaacgtttctacgccctgcgc
tccgtcgtcccaaacgtgtctagaatggataaggcgtccctcctggcagatgctgtctgc
tatatcaacgaactgaaagcaaaagttgagtatctggaatctcagttgcattctcgcatc
aaccaccaagggaaaaccaagaaaatgaaggtggaagtggctgatactgcggacaacccc
ctgcaaaccagcgacacttatagtttgtatcaatctcgggtgtcgacaaaacctatatta
aagattaataacaaggccacgatcaagaataatatcagtggttttggtgaagtggaagtg
aaaatcgtgggtgaggacgcaatgataagggtgcagtcagggaatgcgaacttgcccccg
gcgaaactgatggatgctctgagagaaatgaaggcacagatccagcatgcaagcatgtcg
tgtgtgaatgagataatgctgcaagacgttgtggttaggatcccaggtgccatagacgaa
gatgaactcaaaaccgatctcattaggagattagaccgctag
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