Cynara cardunculus var. scolymus (artichoke): 112522376
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Entry
112522376 CDS
T05604
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04016
MAPK signaling pathway - plant
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
112522376
04075 Plant hormone signal transduction
112522376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112522376
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112522376
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GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
LUC7
PRP1_N
bHLH_INO4
Motif
Other DBs
NCBI-GeneID:
112522376
NCBI-ProteinID:
XP_024987235
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All DBs
Position
LG 12:7544838..7546460
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AA seq
510 aa
AA seq
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MDDFIVSPSSSSSIVSFPKTTIPPPSDHTLQQKLQHLLQSQPQPWAYAIFWQTFNDDSNG
CVSLSWGDGHLQSNNDLPITTLPSTSGGSATFLSDLEPDSRKSLIREIQALLGPDNRDDA
EWFYVISLTRSFTPGDGSVPGTAFGSNTMIWLSGVDQLRSFNCERAKEARIHGLETLVCI
PTPNGVLEIGSHHVIEESWNLAHQAQSVFGGXSYNLNDDHHNIISFADMMFMAGGLQEEG
MNTIDFESTTPDNQMSKNVEKLYINKSNTTAATTMNTYAETASEHSDSDCQLVLATTERR
IQKKKGKKPGGRDPPVNHVEAERQRREKLNQRFYALRSVVPNVSRMDKASLLADAVCYIN
ELKAKVEYLESQLHSRINHQGKTKKMKVEVADTADNPLQTSDTYSLYQSRVSTKPILKIN
NKATIKNNISGFGEVEVKIVGEDAMIRVQSGNADLPPAKLMDALREMKAQIQHASMSCVN
EIMLQDVVVRIPGAIDEDELKTDLIRRLDR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggatgattttattgtctccccatcttcatcttcttccatcgtttcttttcccaaaact
acaatccctcccccttctgatcataccctacagcaaaagctccaacacctccttcaaagc
cagcctcaaccatgggcatacgccattttctggcagaccttcaacgacgactccaatggc
tgtgtctccttgtcctggggagacggtcatctccaaagcaacaacgaccttccaatcacc
accttgccctcgacctctgggggttccgccacctttctctccgatttggaacctgacagt
aggaagtctttaatcagagaaatccaggccctccttggaccagacaaccgcgacgacgcc
gaatggttctatgtcatctctttaaccaggtcatttacccccggagacggatcggttcca
ggtacggctttcggttcaaacactatgatctggttaagtggggtggatcagctccgttct
tttaactgtgagagagctaaagaagctcggatccacgggctagagaccctggtttgcatc
ccgacaccaaatggtgttttagaaataggttcacatcatgtcatcgaggagtcgtggaat
ttggctcatcaggctcagtcagtctttggtggggkttcttacaaccttaaygacgatcat
cacaatattatttcttttgctgatatgatgtttatggctggcgggctgcaagaggagggt
atgaacacgatagattttgaatcaacaacacccgataaccagatgtccaagaacgttgaa
aaattatacataaacaagagcaacactactgctgctacgaccatgaatacctatgcggaa
actgcatcggagcattccgattccgactgccagctggttcttgccacgacagagaggcgt
atacagaagaaaaaaggaaagaagccaggtggtcgggatcctcctgttaaccacgtggag
gcagaaaggcaacggcgtgagaagctcaaccaacgcttctacgccctgcgctccgtcgtc
ccaaacgtgtctagaatggataaggcgtccctcctggcagatgctgtctgctatatcaac
gaactgaaagcaaaagttgagtatctggaatctcagttgcattctcgcatcaaccaccaa
gggaaaaccaagaaaatgaaggtggaagtggctgatactgcggacaaccccctgcaaacc
agcgacacttatagtttgtatcaatctcgggtgtcgacaaaacctatattaaagataaat
aacaaggccacgatcaagaataatatcagtggttttggtgaagtggaagtcaaaatcgtg
ggtgaggacgcaatgataagggtgcagtcggggaatgcggacttgcccccagcgaaactg
atggatgctctgagagaaatgaaggcacagatccagcatgcaagcatgtcgtgtgtgaat
gagataatgctgcaagacgttgtggttaggatcccaggtgccatagacgaagatgaactc
aaaaccgatctcattaggagattagaccgctag
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