Cynara cardunculus var. scolymus (artichoke): 112522382
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Entry
112522382 CDS
T05604
Name
(RefSeq) DNA topoisomerase 1 alpha-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccav03032
]
112522382
Enzymes [BR:
ccav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
112522382
DNA replication proteins [BR:
ccav03032
]
Eukaryotic type
DNA Topoisomerases
112522382
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Fn3_PTPRU
Motif
Other DBs
NCBI-GeneID:
112522382
NCBI-ProteinID:
XP_024987242
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All DBs
Position
LG 12:26391942..26402490
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AA seq
806 aa
AA seq
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MNYSSDEDDKPLVFKRSSTSDKFKHSAQQKAAAVVRQEKPSPKTVAKQNSDSEDSEDDKP
LSSRISTVPKANSNHVKVGPSMSASQRSKTQVKNEDSDDEKPLSSKFTPKSYVSASIRKH
DDSDDDKPLSSKVKQNGSASRDNQSRKPNIGLNKRPPNEENSLGQSSIKKPKLSDSSAPI
NRKPVSVKPESETDDDENDHVPISQRMKNKAPSGSKSASIKQKSIKVNSSSFKKTIKKSK
KIEKNSKYSKPSKVPPGSGEGQKWTSLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEE
VATMFAVMLDTDYMTKPVFKENFMGDWRKILGRNHTIQNLDDCDFRPIYEWHQREKEKKK
QMSTEEKKAVKEEKMKLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI
RPSDITINIGKGSPIPECPIPGQSWKEVRHDNTVTWLAYWNDPINPKDFKYVFLAASSSL
KGQSDKEKYEKARSLKGYIEGIRKAYTRDFGNKDVTKRQVAVATYLIDKLALRAGNEKDD
DEADTVGCCTLKVENVEPEPPNILKFDFLGKDSIRYQNEVEVELPVFKAIQQFRTGKKDG
DDLFDKLDTSTLNAHLKELMPGLTAKVFRTYNASFTLDDMLNRDMKGGNVAENLVVYNQA
NKEVAIICNHQRTVSKSHSAQMTRLNEKIEELKGVVEELETDLARAKKGKPPLKGSDGKT
KRNMNPEALHKKIVQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRREV
PIEKVFNKSLLAKFAWAMDVEPSFRF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaattattcatctgatgaggatgataagcccttggttttcaaaaggagctcaacttct
gataaatttaagcattctgctcaacagaaggcagctgcagttgttaggcaagagaagcct
tcccctaaaactgttgctaagcaaaacagtgactcggaggattctgaagatgacaaacca
ttgagttctagaatttcaactgtacctaaggcaaactccaaccatgtgaaagtaggacct
agcatgagtgcatctcaacgttcaaaaacacaagtaaaaaatgaagattctgatgacgag
aaacctttatcttcgaaattcacgcccaaatcctatgtcagtgcatctatccgcaagcat
gatgattctgatgatgataaaccattatcatcgaaagttaagcaaaatggttctgcatca
agggataatcaaagtagaaaacctaatattggcttaaataagagacctccaaatgaggaa
aattctttaggtcagtcatcgattaaaaagccaaagctttcagattcatccgcaccaatc
aaccgcaagccagtttctgtgaaaccagagtctgagacagatgatgacgagaatgatcac
gttcccatatctcagaggatgaagaacaaagctccatcaggtagtaaatcggcatccata
aaacagaagtcgattaaagtaaattcctcttcgtttaagaaaaccatcaagaagtcgaag
aagatagagaaaaattcaaaatactctaagccgtcaaaggtcccccctggatccggtgaa
gggcagaagtggacaagtttggttcataatggtgtaattttcccaccaccatacaagcct
catggggttaagatgctctacaaggggaagcctgttgatttgactcccgaacaggaggag
gttgcaacaatgtttgcagtgatgttagatactgattacatgaccaaacctgtgttcaaa
gaaaatttcatgggtgattggcgcaagatattgggaagaaaccacacaatccagaattta
gatgactgtgatttcagacctatatatgaatggcatcagagggaaaaggagaaaaagaag
caaatgagtacagaagagaagaaagctgtaaaagaagaaaagatgaagctcgaggagaaa
tatatgtgggccatagttgatggggtgaaagagaaggttggaaacttccgagtagagcca
cccgggttgttccgaggccgtggagagcatccaaagatgggaaagctgaaaaagcgcatc
cgtccgagtgatattacaataaatattgggaagggctccccaatccctgaatgtccaatt
cctggtcaaagctggaaagaagttaggcatgataatactgtcacttggttagcatattgg
aatgatccgataaatccgaaggacttcaagtatgtgtttctagccgcaagcagttccctg
aagggtcaaagtgacaaggaaaaatacgagaaagcaaggtcattgaagggatacattgaa
ggcatcagaaaagcttacactagagattttggaaataaggatgtgacaaagaggcaagtg
gcagtggctacatatctcatcgataaattagcacttagggcagggaatgagaaggatgat
gatgaagctgatacagttggttgctgcacgttgaaagtagaaaacgttgagccagagcct
ccgaatatcctgaagtttgacttccttggtaaagattctatacggtaccaaaatgaggtt
gaagtagagcttccagtgttcaaagcgattcaacagttccgaacagggaagaaagatggc
gatgatctatttgacaagctggataccagtactttgaatgctcatctaaaggaactcatg
cctggcctgacagcaaaagttttccgtacatataatgcatcattcacattggatgatatg
ttaaatagggatatgaagggtggaaatgttgctgaaaacttagtcgtttataaccaagca
aacaaggaggttgcaatcatttgtaatcatcaacggactgtttcaaagtctcatagtgca
caaatgacgaggttgaatgagaaaatagaggaactaaagggtgttgtagaagaactggaa
actgatttggctcgtgcaaagaaagggaagcctccattgaagggttctgatgggaagacg
aagagaaatatgaaccctgaagcgttacataagaagattgttcaaactaatgcaaagatt
gagaaaatggaacgcgacaaagagaccaaagaagacttgaaaactgtggcattgggtact
tcaaaaatcaactatcttgatcctagaataactgtggcatggtgtaagcgtcgtgaagtt
cccatcgagaaggtatttaacaagtctttactggcaaagttcgcttgggcgatggatgtg
gaacctagcttcaggttctag
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