Cynara cardunculus var. scolymus (artichoke): 112522477
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Entry
112522477 CDS
T05604
Name
(RefSeq) protein argonaute 2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112522477
03036 Chromosome and associated proteins [BR:
ccav03036
]
112522477
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112522477
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112522477
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112522477
microRNA pathway
RISC loading complex
112522477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Tex_central_region
Motif
Other DBs
NCBI-GeneID:
112522477
NCBI-ProteinID:
XP_024987369
LinkDB
All DBs
Position
LG 12:4998731..5002600
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AA seq
1006 aa
AA seq
DB search
MEQSRTNYNRGGNGAGYTRGRGGRNTGGRGYSSGGVQAGGRGGEGGRGTDGGYYPRGRGG
RNRDYQQRYSNQQQEQYGDARDHRVSVGGGSQQISRTPTHPRPNADHFGGNQEARVWSRI
VSGSSQPIKSPPSQIDLSVSDLQIQEVPVSSSKDIVEHSKDDAENGYVPIKRPDRGTLAV
RSVSLLVNHFPVKYDSSNSILRYDVDVKLEASSSSRSVKKSIPKSDLRLIQEKLCSDYPD
RFPLLKTAYDGEKNIFSAVLLHAGTYNVQLFGKSYICTIKYGSELRLSKLQEFLNRNAFQ
IPRDVLQALDVVMKANLFREKVSVGRGMYPRVHRRDDDLRCGVAAIRGIQQSLKVTSNGL
IMCTDYSVIPFRKRMPVIEFLKEHIREIQVVNDIGRFRNKVMSALEGLRVSVTHRRTNQK
YIVSGLTEKLTNELSFELEDLEGKKEPEIVMLTDYFQEKWEKVIVHKTIPCLKLGNGKKP
NYVPMEFCVLAEDRRFPKEQLGREAARQLKDLCLLPPDFRRNEICSMMREEYGPGSHGGE
VIQNFEFGVGMDMTAVDGRVMPPPILKLGGPRGTTNTTVDRLKCHWNLLQGKRFVDGIPL
ERWAMIDFSSADRWNRLNVNPFIGKLVNRCGSLGVHMKDPLVVHQTTMREFLDVDRLHRL
FSQVVEDCRRKDSGRLEMIVCVMACKDDGYKHLKWVTETKIGVITQCCLSVHANKASDQF
LANLGMKINAKLGGSNVELIERFPRFTGGDHCMFIGADVNHPASSNTLSPSVAAVVGSVN
WPAATRYAARVSPQSHRKEEIVDFGKMCLDLVNTYARQNGVKPNKIVVFRDGVSDGQFDM
VLNKEMVDMKKAIYDEHYRPCVTFVVAQKRHTTRLFLSPDGRESGNVPPGTVVDTTIIHP
SEFDFYLCSHFGGIGTSKPTHYSVIWDENGFSSDEMQKLIYHLCYIFARCTKPVSLVPPV
YYADLVAYRGRMFQEVAMELESGGSSSFDQFFYNLEDHLKDSMFFV
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagcaggaccaattataatcgtggaggaaatggcgcaggctacacccgtggc
cgtggcggccggaacactggaggacgaggttatagttccggtggcgtacaagctggtggt
agaggaggcgaaggtgggcgtggaactgatggtggttactatccccgtggtcgtggtgga
cgaaacagagattaccaacagcgttatagtaatcaacagcaggagcagtatggagacgct
agagatcatagagtctccgttggtggtggtagtcagcagatctctcggactcctacacac
ccaaggccgaatgcggatcattttggtgggaatcaagaagcaagggtgtggagtcgtatt
gtatctggttctagtcaaccaattaagtctcctccgtctcagatcgacctttctgtttca
gatcttcagattcaggaagttccggtatcatcttcaaaggatattgtagaacattcaaag
gatgatgcagaaaatggctatgtaccaattaagcgtcctgaccgaggtacacttgcagtg
aggtcggtgagtcttcttgttaaccattttccggtcaagtatgattcatcgaacagcatc
ttacgctacgatgtagatgttaagctagaggcctcctcttctagtcgatctgtgaaaaaa
tcaatacccaaatcggacctccgattgattcaggaaaaattatgttccgattaccctgat
cggttcccgttactaaaaaccgcctacgatggtgaaaagaacatatttagtgcagtcttg
ttgcatgccggaacctataatgtgcaattatttggtaaatcttatatatgcaccatcaag
tatggaagcgagttaaggctctcaaagcttcaagaattcttgaatcgaaatgctttccag
atccctcgtgatgtgctgcaggcactggatgtagtaatgaaggcgaatcttttccgggaa
aaggtttcagtcggccgagggatgtaccctcgagttcatcgaagggatgatgaccttcga
tgtggtgttgctgccattagaggcattcagcagagcttaaaggtcacttctaatgggttg
ataatgtgtaccgattactctgtcataccttttcgcaagaggatgcccgttatcgaattc
ctgaaggagcatattcgggagattcaagtggttaacgacatcggaaggtttaggaacaaa
gttatgagtgcattggaaggattgagggtgagtgtgactcatcgtcgcaccaaccagaag
tacattgtttctgggttgactgaaaagctcacaaacgagctctcttttgaactagaagat
ctcgaagggaagaaagaaccagaaatcgttatgctaacggattatttccaagagaagtgg
gagaaagtaatagttcataagactattccttgtttgaaattgggaaatggcaaaaagcca
aattatgttccgatggaattctgtgtcttggctgaggatagaaggtttccgaaggagcaa
ctgggtcgggaggctgcccgacaactaaaagatttgtgccttcttcctccagatttccgg
cggaatgagatatgcagcatgatgcgtgaagagtatgggcctggcagtcatggtggcgag
gtgattcagaattttgaattcggggttggtatggacatgacagcagtcgatggtcgtgtg
atgccaccgcctatactgaagcttggtggtccacgtggtacaacaaacacgacagttgac
agactgaaatgtcactggaatcttctccaggggaaacgtttcgttgatgggataccactg
gagaggtgggcaatgatcgatttcagttctgctgatcgttggaataggctgaatgtcaac
ccgttcattgggaaattggtgaaccgatgcggaagtttaggggttcacatgaaagatccg
cttgttgttcatcaaaccaccatgagggagttcttggatgttgatagactccatcgtctt
ttttcacaagtcgtggaggactgtcgtcgaaaagacagtggacggctggaaatgattgtt
tgtgtgatggcttgcaaagacgatggatacaagcatctcaaatgggttactgagacgaag
attggggtgattactcaatgttgcttgtcggttcatgccaataaagcgagcgatcagttt
cttgccaacttaggtatgaagatcaacgcgaagctaggtggcagcaatgtggaactcatt
gagagattcccacgatttactggtggagatcattgtatgttcattggggcggatgtaaac
cacccggcttcatcaaatacgctatctccatctgttgcagccgttgttgggtcggtcaac
tggcctgctgcaactcgttatgctgctcgtgtttccccacaaagccaccgcaaagaggag
attgtcgacttcgggaagatgtgtttggatctggtgaatacatatgcgcggcagaacgga
gtgaaaccaaacaagattgtagtttttcgtgacggtgtgagtgacgggcaattcgatatg
gttctcaacaaagagatggttgatatgaagaaagccatttatgatgaacactaccgcccg
tgtgtcacctttgttgtggcccagaaacggcacacaactcgtctgtttctaagcccagat
gggagggagtcgggtaatgtgccgccgggaacggtggtggacaccaccataatccatcca
tctgagtttgatttctatctttgcagccattttggagggattggaacaagtaaacccact
cactactctgtgatttgggatgagaacgggttctcatctgatgagatgcagaagctgata
taccatctttgttacatctttgcacgttgcacgaaacccgtgtcgttggtcccaccggtt
tactatgcggatcttgttgcgtacaggggtcggatgtttcaagaagtggcgatggaacta
gagtctggtgggtcttcttcattcgatcagttcttctacaatcttgaggatcacctcaag
gattccatgttctttgtttga
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integrated database retrieval system
