Cynara cardunculus var. scolymus (artichoke): 112522492
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Entry
112522492 CDS
T05604
Name
(RefSeq) floral homeotic protein AGAMOUS-like
KO
K09264
MADS-box transcription factor, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112522492
Transcription factors [BR:
ccav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
112522492
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
FimV_N
DUF4337
ZapB
UPF0242
HMMR_N
Motif
Other DBs
NCBI-GeneID:
112522492
NCBI-ProteinID:
XP_024987412
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Position
LG_12
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AA seq
244 aa
AA seq
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MSFPNDSGEMSPQRKLGRGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVAL
IVFSSRGRLYEYANNSVKGTIDRYKKACLDPPSSGSVAEANAQFYQQEAAKLRHQIANLQ
NQNRNIMGESLGNMPAKDLKNLESKLEKGISRIRSKKNELLFAEIEYMQKRENELHNSNQ
FLRAKIAENERAQQQHMSLMPGSSDYDQLVAPHQPFDGRNYLQVNDLQPNNNYSCQDQTP
LQLV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttccgaatgactcaggggagatgtctccacaaagaaaactcgggaggggaaag
atcgaaatcaagcggatcgaaaacacaacgaatcgacaggtgaccttttgcaagcgtcgt
agtggtttgctcaagaaggcctatgaattgtctgttctttgtgatgctgaggttgctctc
atcgtcttctctagccgtggccgcctttatgagtacgccaacaacagcgtgaaaggaacc
atagataggtacaaaaaggcatgcctagatccaccaagcagtggctctgttgctgaagcc
aatgctcagttttaccaacaagaagctgcgaaactgcgtcaccagatcgcgaaccttcag
aatcaaaacaggaacatcatgggcgaatcgctgggaaacatgcctgcaaaagacctcaag
aatcttgaaagcaagttagagaaagggattagcaggatcagatcaaaaaaaaatgaactt
ctatttgctgaaatcgagtatatgcaaaagcgagaaaatgagttacataacagtaaccag
ttcctccgggcaaagattgctgaaaacgaaagagcccaacagcagcatatgagcttgatg
cctggaagttctgattacgatcagctagtagcacctcaccagccatttgatggtcgaaac
taccttcaagtcaatgatcttcaaccaaataacaattactcttgccaagatcaaacacct
ctccagttagtgtaa
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