Cynara cardunculus var. scolymus (artichoke): 112522495
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Entry
112522495 CDS
T05604
Name
(RefSeq) ABC transporter B family member 15-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112522495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112522495
04147 Exosome [BR:
ccav04147
]
112522495
04090 CD molecules [BR:
ccav04090
]
112522495
Enzymes [BR:
ccav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112522495
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112522495
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112522495
CD molecules [BR:
ccav04090
]
Proteins
112522495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
Zeta_toxin
AAA_30
RsgA_GTPase
AAA_21
AAA_15
ABC_ATPase
SbcC_Walker_B
DLIC
AAA_23
nSTAND3
AAA_28
Motif
Other DBs
NCBI-GeneID:
112522495
NCBI-ProteinID:
XP_024987423
LinkDB
All DBs
Position
LG 1:complement(12489691..12496762)
Genome browser
AA seq
1239 aa
AA seq
DB search
MSKNSTETNKRLSNGSFRSIFMHADRVDIFLMVLGFFGAVGDGIAMPTMLFITSTIMNDI
GDSATVSTNVFTDKINENAVNLCYMAIGIWVACFLEGYCWARTAERQASRLRSTYLKAVL
RQEVGYFDLNVTSTAEIITSVSSDSLLIQEVISEKVPVFVMNVSIFGGAYVVGFILLWRL
AIVGLPFILLLVIPGLIYGRVLMSLSRKIREEYNKAGTVAEQAISSVRTVYSFVGENKTI
TEYSSALEGTVKLGLKQGLAKGVTIGSNGVVFAVWSFLSWYGSRLVMYHGANGGTVFAVG
AAVAIGGLSLGSGLSNVKYFSDAIAASERIREMIKRVPEIDSDSMEGEILQEVSGEVEFK
NVNFAYPSRPESVIFKAFNFKVPAGRTVALVGGSGSGKSTVIALLQRFYDPQGGEIYVDG
MSIDKLQLKWLRSQMGLVSQEPALFATTIKENIIFGKEDAAMEEVIEAAKASNAHNFISQ
LPQAYDTQVGERGVQMSGGQKQRIAIARAIIKSPRILLLDEATSALDSESERVVQEALDQ
ASVGRTTIVVAHRLTTIRNADVIAVVNNGQVVESGSHNELIQLENGFYTSLVRLQETKPH
DEPTNHFPLGPSSAFDVHNTSSRRHSIVSRSSSINSVNHGENPNLANEEFPVPSIKRLLA
MNAPEWKEALFGSVGAVLFGAVQPVYAFAMGSMISVYFLADHDEIKHKTMIYALCFAGLG
VFSMVINIIQHYNFAAMGEYLTKRVRERMLSKILTFEIGWFDQDENASGAICSRLAKDAN
VVRSLVGDRSALLIQTFSAVMIACTMGLVIAWRLAVVMIAVQPIIIVCFYCKRVLLKNMS
QKAMKSQDESSKLAAEAVSNLRTVTAFSSQARILKMLQETQKAPMRESIRQAWYAGIGLG
FSQSLMACTWALDFWYGGKLISDGHLGAKALFQTFMILVSTGRVIADAGTMTNDLAKGSD
AVRSVFAVLDRYTLIEPEDPDGKKPEIITGHVELRDVYFAYPSRPDVMIFNRFSINIEAG
KSTALVGQSGSGKSTIIGLIERFYDPMKGVVKVDGRDIKSYHLRTLRKYFALVSQEPTLF
AGTIHENIIYGASEEVSESEIIEAAKAANAHDFIAVLKDGYDTWCGDRGVQLSGGQKQRI
AIARAILKNPAILLLDEATSALDSQSEKVVQDALERMLVGRTSVVVAHRLSTIQSCDTIA
VLEKGKVVEKGNHGSLLGKGASGAYYNLVTLQKPNSANH
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaacagcacagagactaacaaaaggctcagcaatggatctttccgatcgatt
tttatgcatgccgaccgtgttgacatctttctgatggttcttgggttttttggcgccgtc
ggagacggaattgcgatgccgacgatgttgtttatcaccagcacaatcatgaatgatatc
ggagactctgccactgtttccacaaatgtcttcaccgacaaaattaacgagaatgcagta
aatctctgttatatggcaattgggatatgggtagcatgttttcttgaggggtattgctgg
gcaagaacagcagaaaggcaagcatcaagattaagatcaacttatttaaaagccgtttta
cggcaagaagtgggttattttgatttgaatgtaacaagcacggcggagatcattaccagt
gtttccagtgatagccttctcattcaagaggtcatcagtgaaaaggtgccagtgttcgtg
atgaatgtgtcgatttttggtggggcttatgttgtgggatttatattactatggaggcta
gcaattgttgggcttccattcatcctacttttagttataccaggtttgatctatggaagg
gttctgatgagcttatcaagaaagatcagggaggagtataataaggctggtacggtggcg
gagcaggcgatttcttcagtgaggacagtttattcttttgtgggtgaaaataagacgata
acggaatactcttctgctttagaaggaactgtgaagttgggtttaaagcaaggtttggct
aaaggagtgacaattggtagcaacggtgtcgtttttgccgtttggtctttcttgtcatgg
tacggtagtcgattggtgatgtaccatggcgctaacggtggaaccgtgtttgctgttgga
gctgccgtcgccattggtggactatcattgggttctggattatccaacgtcaagtatttt
tcggatgcaatcgctgctagcgaacgcataagagaaatgatcaaaagagtcccggagatt
gattccgatagcatggaaggggagatattacaagaagtttccggcgaagtcgaattcaaa
aacgtaaactttgcatacccgtcgaggccggaatcagtgatattcaaagccttcaacttc
aaagttccggcagggaggacggtggcgttggtcggtgggagtggttctggtaaatcgacg
gtgattgcattgttgcagaggttttacgatcctcaaggaggagagatttatgtagacggg
atgagcatcgataaacttcaactaaaatggcttagatcacaaatgggtttggtaagtcaa
gagcctgctttatttgcaaccaccattaaagaaaacataattttcggcaaagaagatgcc
gccatggaagaagtgattgaagctgcgaaagcttcaaatgctcataacttcatatctcag
ttgcctcaggcctacgacactcaggtcggggaacgaggagttcaaatgtccggtgggcaa
aagcaaagaattgcaattgctcgtgcaataatcaagtcgcctcgtattcttctcttggac
gaggcgacaagtgccctcgactcggaatcagaacgagtcgttcaggaggcactcgatcaa
gcctccgttggtcggaccaccatcgtcgtagctcatcgtctcaccacaatacgaaacgcc
gacgtaatagccgtcgtcaacaacggtcaggtggtcgagtcgggctctcacaacgaactc
atccaactcgaaaacgggttctacacatccctcgtccgcctccaagaaaccaaaccacac
gacgaacccaccaaccatttcccactcggaccatcatcggcattcgacgtccacaacacg
agcagccgtcgacactcgatagtcagccgctcgagctctataaactcggtcaaccacggt
gaaaacccgaacttggccaacgaagaatttccggtaccgtccattaagcggcttttagcg
atgaacgctcctgaatggaaggaagcgttgtttgggagtgtaggagctgttctatttggt
gcagttcagccggtttatgcattcgcaatggggtcgatgatatcggtgtatttcttggct
gatcacgatgagatcaagcacaaaacgatgatttatgcattgtgttttgcgggattgggg
gttttttcgatggtaatcaacatcattcagcattacaattttgcagccatgggtgagtac
ttaacaaagagggtccgagaacggatgttgtcgaagatactcaccttcgaaattgggtgg
ttcgatcaggatgagaatgcgagcggagccatctgttcgaggctcgcgaaagatgccaac
gtggtgagatcgttggttggcgatagatccgcgcttctaattcaaacgttctcggcagtg
atgattgcttgcacgatggggttggtgattgcttggagattagcggtggttatgatcgca
gttcagccgattataatcgtttgcttctattgcaaacgagttttattaaagaacatgtcg
caaaaagccatgaaatcacaagacgaaagcagcaagctcgcagccgaagcggtttcaaat
ctgcgtactgtcaccgccttttcatctcaagcacgaatcctgaaaatgctccaagaaacc
caaaaagcgccaatgcgggaaagcattcggcaagcttggtatgctggaatcgggctcggg
ttctctcaaagccttatggcttgtacttgggctctagacttttggtacggtgggaaattg
attagcgatggtcatctcggggcaaaagcactcttccagacatttatgatcttggtaagc
accggcagggtcatcgcagatgctggaaccatgacaaatgatctagccaaagggtccgat
gcggttcggtctgtgtttgcagtattggaccgttacaccttgatcgaacccgaggacccc
gatggtaaaaagccggagatcattacaggccatgtagagttacgtgacgtttacttcgct
tacccttctcgacctgatgtcatgatctttaaccgtttctcaatcaatatcgaagccgga
aaatcaactgcattagttggacaaagtgggtccggcaagtcgaccataatcgggttaatc
gaacgtttttacgatccgatgaaaggtgttgttaaagtcgatggaagagatataaagtcg
taccatttaagaactctaaggaaatacttcgcactagtgagccaagaaccgacattattc
gctggtactatacacgaaaacatcatctacggggcatcagaggaagtttcggaatcggag
atcatcgaagctgcaaaagcagccaatgctcatgatttcatagcggttttgaaagacggg
tacgatacatggtgcggagatcgaggggtccaactctccggaggacaaaagcaacgcatt
gctatagctcgtgccatactgaaaaaccccgcaattctgttactagacgaggccacgagc
gcgttggatagtcagtcggagaaagtggttcaagacgcactggagcggatgttggtgggg
cggacgagcgtggtggtggcgcaccggctgagtacgatccaaagttgcgatacgattgcg
gttttggagaaagggaaggtggtggagaaagggaaccatggttcgttgctagggaaaggg
gcgagtggagcttattataacttggtcactcttcaaaagcctaattctgctaaccactaa
DBGET
integrated database retrieval system