KEGG   Cynara cardunculus var. scolymus (artichoke): 112522495
Entry
112522495         CDS       T05604                                 
Name
(RefSeq) ABC transporter B family member 15-like isoform X1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    112522495
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ccav02000]
    112522495
   04147 Exosome [BR:ccav04147]
    112522495
   04090 CD molecules [BR:ccav04090]
    112522495
Enzymes [BR:ccav01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     112522495
Transporters [BR:ccav02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    112522495
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   112522495
CD molecules [BR:ccav04090]
 Proteins
  112522495
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_29 AAA_22 AAA_16 Zeta_toxin AAA_30 RsgA_GTPase AAA_21 AAA_15 ABC_ATPase SbcC_Walker_B DLIC AAA_23 nSTAND3 AAA_28
Other DBs
NCBI-GeneID: 112522495
NCBI-ProteinID: XP_024987423
LinkDB
Position
LG 1:complement(12489691..12496762)
AA seq 1239 aa
MSKNSTETNKRLSNGSFRSIFMHADRVDIFLMVLGFFGAVGDGIAMPTMLFITSTIMNDI
GDSATVSTNVFTDKINENAVNLCYMAIGIWVACFLEGYCWARTAERQASRLRSTYLKAVL
RQEVGYFDLNVTSTAEIITSVSSDSLLIQEVISEKVPVFVMNVSIFGGAYVVGFILLWRL
AIVGLPFILLLVIPGLIYGRVLMSLSRKIREEYNKAGTVAEQAISSVRTVYSFVGENKTI
TEYSSALEGTVKLGLKQGLAKGVTIGSNGVVFAVWSFLSWYGSRLVMYHGANGGTVFAVG
AAVAIGGLSLGSGLSNVKYFSDAIAASERIREMIKRVPEIDSDSMEGEILQEVSGEVEFK
NVNFAYPSRPESVIFKAFNFKVPAGRTVALVGGSGSGKSTVIALLQRFYDPQGGEIYVDG
MSIDKLQLKWLRSQMGLVSQEPALFATTIKENIIFGKEDAAMEEVIEAAKASNAHNFISQ
LPQAYDTQVGERGVQMSGGQKQRIAIARAIIKSPRILLLDEATSALDSESERVVQEALDQ
ASVGRTTIVVAHRLTTIRNADVIAVVNNGQVVESGSHNELIQLENGFYTSLVRLQETKPH
DEPTNHFPLGPSSAFDVHNTSSRRHSIVSRSSSINSVNHGENPNLANEEFPVPSIKRLLA
MNAPEWKEALFGSVGAVLFGAVQPVYAFAMGSMISVYFLADHDEIKHKTMIYALCFAGLG
VFSMVINIIQHYNFAAMGEYLTKRVRERMLSKILTFEIGWFDQDENASGAICSRLAKDAN
VVRSLVGDRSALLIQTFSAVMIACTMGLVIAWRLAVVMIAVQPIIIVCFYCKRVLLKNMS
QKAMKSQDESSKLAAEAVSNLRTVTAFSSQARILKMLQETQKAPMRESIRQAWYAGIGLG
FSQSLMACTWALDFWYGGKLISDGHLGAKALFQTFMILVSTGRVIADAGTMTNDLAKGSD
AVRSVFAVLDRYTLIEPEDPDGKKPEIITGHVELRDVYFAYPSRPDVMIFNRFSINIEAG
KSTALVGQSGSGKSTIIGLIERFYDPMKGVVKVDGRDIKSYHLRTLRKYFALVSQEPTLF
AGTIHENIIYGASEEVSESEIIEAAKAANAHDFIAVLKDGYDTWCGDRGVQLSGGQKQRI
AIARAILKNPAILLLDEATSALDSQSEKVVQDALERMLVGRTSVVVAHRLSTIQSCDTIA
VLEKGKVVEKGNHGSLLGKGASGAYYNLVTLQKPNSANH
NT seq 3720 nt   +upstreamnt  +downstreamnt
atgagtaaaaacagcacagagactaacaaaaggctcagcaatggatctttccgatcgatt
tttatgcatgccgaccgtgttgacatctttctgatggttcttgggttttttggcgccgtc
ggagacggaattgcgatgccgacgatgttgtttatcaccagcacaatcatgaatgatatc
ggagactctgccactgtttccacaaatgtcttcaccgacaaaattaacgagaatgcagta
aatctctgttatatggcaattgggatatgggtagcatgttttcttgaggggtattgctgg
gcaagaacagcagaaaggcaagcatcaagattaagatcaacttatttaaaagccgtttta
cggcaagaagtgggttattttgatttgaatgtaacaagcacggcggagatcattaccagt
gtttccagtgatagccttctcattcaagaggtcatcagtgaaaaggtgccagtgttcgtg
atgaatgtgtcgatttttggtggggcttatgttgtgggatttatattactatggaggcta
gcaattgttgggcttccattcatcctacttttagttataccaggtttgatctatggaagg
gttctgatgagcttatcaagaaagatcagggaggagtataataaggctggtacggtggcg
gagcaggcgatttcttcagtgaggacagtttattcttttgtgggtgaaaataagacgata
acggaatactcttctgctttagaaggaactgtgaagttgggtttaaagcaaggtttggct
aaaggagtgacaattggtagcaacggtgtcgtttttgccgtttggtctttcttgtcatgg
tacggtagtcgattggtgatgtaccatggcgctaacggtggaaccgtgtttgctgttgga
gctgccgtcgccattggtggactatcattgggttctggattatccaacgtcaagtatttt
tcggatgcaatcgctgctagcgaacgcataagagaaatgatcaaaagagtcccggagatt
gattccgatagcatggaaggggagatattacaagaagtttccggcgaagtcgaattcaaa
aacgtaaactttgcatacccgtcgaggccggaatcagtgatattcaaagccttcaacttc
aaagttccggcagggaggacggtggcgttggtcggtgggagtggttctggtaaatcgacg
gtgattgcattgttgcagaggttttacgatcctcaaggaggagagatttatgtagacggg
atgagcatcgataaacttcaactaaaatggcttagatcacaaatgggtttggtaagtcaa
gagcctgctttatttgcaaccaccattaaagaaaacataattttcggcaaagaagatgcc
gccatggaagaagtgattgaagctgcgaaagcttcaaatgctcataacttcatatctcag
ttgcctcaggcctacgacactcaggtcggggaacgaggagttcaaatgtccggtgggcaa
aagcaaagaattgcaattgctcgtgcaataatcaagtcgcctcgtattcttctcttggac
gaggcgacaagtgccctcgactcggaatcagaacgagtcgttcaggaggcactcgatcaa
gcctccgttggtcggaccaccatcgtcgtagctcatcgtctcaccacaatacgaaacgcc
gacgtaatagccgtcgtcaacaacggtcaggtggtcgagtcgggctctcacaacgaactc
atccaactcgaaaacgggttctacacatccctcgtccgcctccaagaaaccaaaccacac
gacgaacccaccaaccatttcccactcggaccatcatcggcattcgacgtccacaacacg
agcagccgtcgacactcgatagtcagccgctcgagctctataaactcggtcaaccacggt
gaaaacccgaacttggccaacgaagaatttccggtaccgtccattaagcggcttttagcg
atgaacgctcctgaatggaaggaagcgttgtttgggagtgtaggagctgttctatttggt
gcagttcagccggtttatgcattcgcaatggggtcgatgatatcggtgtatttcttggct
gatcacgatgagatcaagcacaaaacgatgatttatgcattgtgttttgcgggattgggg
gttttttcgatggtaatcaacatcattcagcattacaattttgcagccatgggtgagtac
ttaacaaagagggtccgagaacggatgttgtcgaagatactcaccttcgaaattgggtgg
ttcgatcaggatgagaatgcgagcggagccatctgttcgaggctcgcgaaagatgccaac
gtggtgagatcgttggttggcgatagatccgcgcttctaattcaaacgttctcggcagtg
atgattgcttgcacgatggggttggtgattgcttggagattagcggtggttatgatcgca
gttcagccgattataatcgtttgcttctattgcaaacgagttttattaaagaacatgtcg
caaaaagccatgaaatcacaagacgaaagcagcaagctcgcagccgaagcggtttcaaat
ctgcgtactgtcaccgccttttcatctcaagcacgaatcctgaaaatgctccaagaaacc
caaaaagcgccaatgcgggaaagcattcggcaagcttggtatgctggaatcgggctcggg
ttctctcaaagccttatggcttgtacttgggctctagacttttggtacggtgggaaattg
attagcgatggtcatctcggggcaaaagcactcttccagacatttatgatcttggtaagc
accggcagggtcatcgcagatgctggaaccatgacaaatgatctagccaaagggtccgat
gcggttcggtctgtgtttgcagtattggaccgttacaccttgatcgaacccgaggacccc
gatggtaaaaagccggagatcattacaggccatgtagagttacgtgacgtttacttcgct
tacccttctcgacctgatgtcatgatctttaaccgtttctcaatcaatatcgaagccgga
aaatcaactgcattagttggacaaagtgggtccggcaagtcgaccataatcgggttaatc
gaacgtttttacgatccgatgaaaggtgttgttaaagtcgatggaagagatataaagtcg
taccatttaagaactctaaggaaatacttcgcactagtgagccaagaaccgacattattc
gctggtactatacacgaaaacatcatctacggggcatcagaggaagtttcggaatcggag
atcatcgaagctgcaaaagcagccaatgctcatgatttcatagcggttttgaaagacggg
tacgatacatggtgcggagatcgaggggtccaactctccggaggacaaaagcaacgcatt
gctatagctcgtgccatactgaaaaaccccgcaattctgttactagacgaggccacgagc
gcgttggatagtcagtcggagaaagtggttcaagacgcactggagcggatgttggtgggg
cggacgagcgtggtggtggcgcaccggctgagtacgatccaaagttgcgatacgattgcg
gttttggagaaagggaaggtggtggagaaagggaaccatggttcgttgctagggaaaggg
gcgagtggagcttattataacttggtcactcttcaaaagcctaattctgctaaccactaa

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