Cynara cardunculus var. scolymus (artichoke): 112522496
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Entry
112522496 CDS
T05604
Name
(RefSeq) AP-1 complex subunit gamma-2-like isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112522496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112522496
Membrane trafficking [BR:
ccav04131
]
Endosome - Golgi transport
Others
AP-1 complex
112522496
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
INTS1_R4
Cnd1
HEAT_2
Motif
Other DBs
NCBI-GeneID:
112522496
NCBI-ProteinID:
XP_024987420
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Position
LG 12:complement(1143049..1160665)
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AA seq
878 aa
AA seq
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MNPFSSGTRLRDMIRAIRACKTAAEERAVVRKECASIRAAVSDNDNDYRHRNLAKLMFIH
MLGYPTHFGQMECLKLIAAPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQY
IVGLALCALGNICSAEMARDLAPEVERLLQFRDPNVRKKAALCSIRIVKKVPDLVENFVN
PVASLLKEKHHGVLLTAMQLCADLCILSEEALEYFKKRCTEGLVKVLKDAVNSPYAPEYD
ISGIADPFLQIRLLRLLRILGHGDADASDCMNDVLAQVATKTESNKNAGNAILYECVETI
LSIEDSGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAISVDGQAVQRHRATILECVKD
SDASIRKRALELVYLLVNESNVKPLTKELIDYLEVSDQDFKGDLTARICSIVEKLSPDKL
WYIDQMLKVLCEAGNYVKDEVWHALIVVITNASNLHGYTVRSLYRAIQTSVDQEAVVRVA
VWCIGEYGDLLMNNTGMLDLEEPITVTESDAVDVIELAIKRHTSDLTTRAMCLIALLKLS
SRFPSSSQRIKDIVTQSKGSLLLELQQRSIEFDSIIEKHQNLRAALVERMPVLDEATYSG
RRSGSVPAAVSTSQGNALHLPNGVAKMADAPLLDLLDLSVDEPAAPNSSGGNFLQDLLGA
DISSSSSQSVSGKIQAQKSGTDVLLDLLSTGSAPAQNGSSTPDIFSISQDNKTSISALDS
LSSPMVPPVQASPITGGSPMDLLDGFGPNPPVPKDNGPAHPPIVAFESSSLKIIFNFSKE
PESPQTTLIEANFTNKSSEVYTDFIFQAAVPKFLQLHLEPASGNTLPSSSSGSITQKLRV
TNNQHGKKSIMMRIRISYKLNGKDMLEEGQISNIPRDL
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttctcgtcagggacgcgtctaagggacatgattcgggcaatacgtgcctgt
aaaactgcagcagaggaacgtgctgttgttagaaaggagtgtgcttctattcgtgcagca
gttagcgacaatgacaatgattatagacaccgtaatttggcaaagctcatgtttattcac
atgctagggtatcccacacattttggtcaaatggaatgcctcaagttaattgcagctcct
gggtttccagagaagagaataggatatcttggacttatgctgcttctcgatgaaagacag
gaagttttgatgcttgtcaccaattcattaaagcaagaccttaaccataccaaccagtat
attgtgggactggctctttgtgctttgggcaatatatgttctgctgaaatggctcgtgat
cttgcacctgaagttgaaaggctgctgcaatttcgagatccaaatgttcggaagaaagca
gcactatgctctattaggattgtaaagaaagtccccgaccttgtagagaatttcgtaaac
cctgttgcttccttactcaaagaaaagcatcatggagttcttttaactgcgatgcagctt
tgtgcagatctgtgtatactgagtgaagaggctcttgaatatttcaagaagagatgcacg
gagggcttggtaaaagttctgaaggacgctgtgaacagtccatatgctcccgaatacgac
atttctgggattgccgacccttttcttcagataagattgctgcgccttttacgcatattg
ggccatggagatgctgatgctagtgattgcatgaatgatgttcttgctcaggtggcaaca
aaaactgagtcaaacaagaatgcagggaatgccatcctttatgaatgtgtagaaactatt
ctgagcattgaagatagtggtggcttgcgtgttcttgcaattaatattttggggcggttc
ttgtcaaaccgtgacaacaatatcagatatgttgcattgaacatgctgatgaaagcaata
tcagtcgatggtcaagccgtgcagagacatcgtgcaacaatcttagaatgtgtgaaggat
tcagatgcttcaattcgcaaaagagcccttgaacttgtgtatcttctggtgaatgagagc
aatgtaaaacctttgaccaaggagttaattgattatctggaagtaagtgaccaggacttc
aagggagatcttactgcaagaatttgctccattgtggaaaagctttccccagataaactt
tggtacattgatcaaatgctcaaggttctttgtgaggctggaaattatgtaaaggatgaa
gtatggcatgctctaattgttgtcataaccaatgcatctaacctccacggatatacagta
aggtcactctatagagcaatccaaacatcagttgaccaggaagcagttgttagggtggca
gtatggtgcatcggagaatatggtgacttgttgatgaacaatactggaatgcttgatcta
gaggaacctataactgtaacagaatctgatgcagtggatgttatagaacttgctatcaag
cgccatacatctgatcttactactagggcaatgtgtttgattgctttgctgaagctgtct
tcacgtttcccttcttcttcacagagaataaaagacattgttactcaatctaaaggaagc
cttctgcttgaactgcagcagagatcaattgagtttgattccataattgaaaagcatcaa
aatttaagggctgccctggttgagaggatgccagttcttgatgaagccacttacagtgga
aggaggtctggttctgtgccagcagctgtttccacctcacagggaaatgcactacatctt
ccaaatggagttgccaaaatggctgatgcccctctattagacttgcttgatctaagtgta
gatgaacctgcagcacctaattcttcgggtggcaattttcttcaggaccttcttggtgct
gatatctcatcatcttcatcacaatcagtttcaggtaaaattcaggcacaaaaaagtggc
acagatgttctgctggatctattgtcaaccgggtcagctccggctcaaaacggctcatct
acacctgatatattttccataagtcaagataataaaacttcaattagtgctttagatagt
ctttcatcacctatggtaccgccagtacaagcctcgcctataacaggaggttcccctatg
gacttgttagacggatttggtcctaaccccccagtacctaaagacaatggtcctgcacat
ccaccaattgttgcatttgagagcagttcgttgaagataattttcaacttctctaaggaa
cccgaaagtccgcagacaacactcattgaggcaaattttacaaacaagtcttcagaggtt
tatacagatttcatcttccaggcagcagtgccgaaattccttcagttgcatttagagcct
gctagtggtaatactcttccttcgagtagcagtggatcaataacacagaaattacgagtt
accaacaatcaacacggcaagaaatcgatcatgatgcgtatacgaataagctacaagttg
aatgggaaagatatgttggaagaagggcaaatcagtaacatccctcgcgacttgtga
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