Cynara cardunculus var. scolymus (artichoke): 112522534
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Entry
112522534 CDS
T05604
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2-like isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112522534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112522534
Membrane trafficking [BR:
ccav04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
112522534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
BIG2_C
DCB
Sec7-like_HDS
Mon2_C
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
112522534
NCBI-ProteinID:
XP_024987495
LinkDB
All DBs
Position
LG 12:complement(9094322..9111318)
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AA seq
1790 aa
AA seq
DB search
MAFSEAESRLVNKILVPALEKIIKNSSWRKHSKLAQESKLVLERITSSEKPSPTSEDSQS
DVDTSPQSPAPGVLQDSGTNELSLAESELILSPIINACSSGNVKIAEPALDCIQKLIAHG
YLRGEADPSGGPDAKLLAKLIDSVCKCHDFGEEGVELLVLKTILSAVTSVSLRIHGDSLL
QIVRTSYDIYLGSKYVVNQTTAKASLVQMLVIVFRRMEADSSTVPVQPIVVAELMEPTEK
GGDGDGTMTVFVQGFISKVIHGMDGVLNPGTRVGSNAGGGGVHDGAFETKTSTVESTNPA
DLLDSTDKDMLDAKYWEISMYKTALEGRKGELADEEVDRDDDIEVQIGNKLRRDAFLVFR
ALCKLSMKTPPKDALADPQLMRGKIVALELLKILLENAGAIFRTSERFLGAIKQYLCLSL
LKNSASTLIIVFQLSCSIFISLLSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIV
LRFLKRLCVDSQILVDIFVNYDCDVNSSNIFERMVNGLLKTAQGVSPGVATTLLPPQDIT
MKLEAMKCLVAVLKSMGDWMNHQLRIPDPHSAKKAELVDNSPEIGNPPMENGIANDRESF
EGSDSHSEASSEVSDASTIEQRRAYKLELQEGISLFNRKPKKGIEFLINVNKVGNSPEEI
AEFLKNASGLNKTLIGDYLGEREDLPLKVMHAYVDSFDFHGMEFDEAIRAFLRGFRLPGE
AQKIDRIMEKFAERYCKCNPKAFISADTAYVLAYSVIMLNTDAHNAMVKNKMSADDFIRN
NRGIDDGKDLPEEYLRSLFERISRHEIKMKEDDFALQQRQSVNSNRILGLDSILNIVVRK
NAEENQTSDDLMRHMQEQFKEKARKSESVYYAATDVFILTLMVEVCWAPMLAAFSVPLDQ
SDDEIIIAQCLEGFRCAIHVTAAMSMKTHRDAFLTSLAKFTSLHSPADIKQKNIEAIKAI
VTIADEDGNYLQDAWEHILTCVSRFEHLHLLGEGAPPDATFFSVNQNESEKSKHTKSYIL
PVLKRKGVGRLQQAAAATRRGSYDSAGIGGNTSAGITTEQVNSLVSKLNMLEQVGEMNRI
FIRSQKLNSEAIVDFVKALCKVSMEELRSTSAPRVFSLTKIVEIAHYNMNRIRLVWTGIW
NVLSDFFVTIGCSENLSIAIFAMDSLRQLSMKFLEREELTNYNFQNEFMKPFVIVMRKSS
AVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEMIEKIVRDY
FPYITETETTTFTDCVNCLIAFTSSRFDKDISLNAIDFLRLCAAKLAKGDLGSSSMDKDK
EVSEKISLSPHYAKKDRRYDNGDLADKEDHLYFWFPLLAGLSELSFDSRPEIRKSALETL
FDTLRNHGHHFSLPLWERVFDSVLFPIFDYVRHAIDPSGENSSEQGIDGDVDELDQDSWL
YETCTLALQLVVDLFVNFYDTVNPLLKKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAG
ELFSDDKWLEVVSSLKEAANATLPDFLFLLSRDGLIVNHEDVSTRRSDGGSAEASMRDEE
LENLWRDRLYTAVSDVKCRAAVQLLLIQAIIEIYNMYRPQLSTKNTLVVFDAVHGVASHA
HKINADTTLRSKLQELGPMTQMQDPPLLRLEIESYQTCLTFLQNLAVDRPPSFEESKVES
QLVDLCQEVLKFYVEIAWPARMTGLSPNRAHWLIPLGSGKKRELAARAPVIVATLQAICS
LGDSSFEKNLSSFFPLVSSLISCDHGSSEVQIALSEMLSSSVGPVLLRSC
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atggctttttcggaagccgaatcccgcctcgtaaacaagatcctagtcccagccctagaa
aaaattatcaagaacagctcttggcgcaagcactcaaaactcgctcaggaatccaaatta
gtactcgaacgcatcacttcctccgagaaaccctctcctacatcagaagacagtcaatca
gatgttgatacgtcaccacaatcaccagcccccggcgtcctgcaagattcaggcaccaac
gaactttccctagccgaatcagaactcattttaagccccatcatcaacgcttgctcttcg
gggaatgtcaagatcgctgaaccagcgctggattgtatacagaagttgattgctcatgga
tatttacgtggcgaagcggaccccagtggtggtcccgatgcaaaattgttagcaaaattg
atcgactcagtttgcaagtgtcatgattttggggaggagggagtggaattgttggtgttg
aagacaattttatcggcagtgacgtcggtatcgttgaggatacatggtgatagtttgttg
cagattgtcaggactagctatgatatttatctagggagtaagtatgtggttaatcagaca
acggcgaaggcgtcattagtgcagatgcttgtgattgtttttaggaggatggaggctgat
tcatcaacggtgccagtgcagccgatcgtggtggcagagctgatggagcctacggaaaag
gggggagatggtgatggaacaatgacggtgtttgttcaagggtttattagtaaagttatt
catggaatggatggggttttgaatccagggactcgggtaggatcaaatgctggtggtggt
ggggtgcatgatggggcgtttgaaaccaagacttcaactgtagagtcaacaaatcctgct
gatttgttagattctacggataaggatatgttggatgctaagtattgggagattagtatg
tataagacggcattggagggccggaaaggggaattggcagacgaggaggttgacagggat
gatgatatagaggttcagattgggaataagctgagaagggatgcgtttttggtgtttcgg
gctctttgtaagctatcaatgaagacccctccgaaagatgcattggcagacccacagttg
atgcgaggaaagatagttgctttggagttgttgaagatcttgttggagaatgctggggct
attttcagaaccagtgaacgatttttgggagccattaagcagtacttatgcctgtctttg
ctaaagaacagtgcatcgacccttataattgtatttcagctctcttgctcaattttcatt
agtctgttgtcaagatttagagcgggattgaaggcagagattggagtattctttcctatg
attgttctcagagttctagagaatgtcgctcaaccaaattttcagcagaagatgatagta
ctgcgatttcttaaaagactatgtgttgattcccagatcttggtagatatatttgtcaac
tatgactgtgatgtcaattcatccaacatttttgaaagaatggtcaatgggcttcttaag
actgcccaaggggtttcacctggagttgcaactacgcttttgccgcctcaggatatcacc
atgaagctagaagctatgaagtgcttagtggctgttttaaaatcaatgggagactggatg
aaccatcaattgcgcattcctgatcctcattctgcaaagaaagctgagttggttgacaac
agtcctgaaattggaaatcctcccatggaaaatgggattgcaaatgatcgtgagtctttt
gagggatcggattctcattccgaagcctccagtgaagtttcagatgcttcaactattgag
caacgccgggcttacaaactcgaacttcaggaaggtatctctctttttaaccgtaagcct
aaaaagggcattgaattcttgatcaatgtgaataaggtggggaattcacctgaagaaata
gcagagttcttaaaaaatgcatctggtttaaacaagactttgataggtgattatcttggg
gaaagagaagatctaccacttaaagtaatgcatgcatatgtggattcatttgactttcat
ggtatggagtttgatgaggcaattagagcctttctacggggctttaggttgcctggtgag
gcacaaaagattgatcgcatcatggaaaagtttgctgaacgttactgcaaatgcaatcca
aaggcgtttatcagtgccgacacagcctacgtccttgcctactctgtgataatgctgaat
actgatgctcataatgccatggtcaagaataagatgtcagctgacgattttataagaaat
aatcgtggcatagatgatggaaaggacttacctgaggagtatctaagatcattgtttgag
cgtatatcaagacatgaaattaaaatgaaagaagatgatttcgcccttcaacagaggcag
tctgtaaactcaaacaggattttgggtttagacagtatattgaatattgtggtgcgtaag
aatgcagaagaaaatcaaacaagtgatgatcttatgcgacacatgcaagaacagtttaaa
gagaaagcacgcaaatcggagtcagtttattatgctgcaacagatgtgtttatacttaca
ttgatggtagaggtgtgctgggctcctatgctagctgcctttagtgttcctcttgaccaa
agtgatgatgagataataatagctcaatgtctggagggatttcgttgtgctatccatgtt
actgcagcaatgtccatgaagactcatcgagatgctttcttgacatcgctggcaaagttt
acttcccttcattcaccagctgatataaaacagaagaacatcgaagctatcaaggcaata
gttacaattgcagatgaagatgggaactatctacaggacgcatgggagcatatcctgaca
tgtgtttctcggtttgaacatttgcatctattgggagagggggctcctccagatgccaca
tttttttctgttaatcagaatgaatctgaaaaatcaaaacatacgaagtcatatatcctt
cctgttcttaaaagaaagggagttggaaggcttcagcaagcagctgcagcaacgagaaga
ggttcatatgatagtgctggcattggtggtaatacttctgcaggcattacgacggagcag
gtgaatagtttggtctctaagttaaacatgctggaacaagttggtgaaatgaatcgtata
ttcattaggagtcagaaacttaacagcgaggcaatagttgattttgtgaaggcactttgc
aaggtgtctatggaggaactacgatctacatctgctccacgagtgtttagcctcacaaaa
atagttgaaattgctcactataacatgaaccgcatcaggcttgtctggacaggcatctgg
aatgtactctctgatttttttgtgactataggttgttctgaaaatctgtcaattgcaata
tttgcaatggattctttacgccaactatctatgaagttcttggaaagggaagagttaact
aattacaattttcagaatgagtttatgaagccttttgtgattgtcatgcgtaaaagtagt
gctgtggaaattagagagctgatcatcagatgtgtctctcaaatggttctatctcgtgtc
aataacgtcaagtcaggatggaaaagcatgttcatggtcttcactacggcagcttatgat
gaccacaaaaatattgtactcctcgcctttgaaatgattgagaagatagtgcgagactat
tttccttacatcactgaaacagaaaccaccacttttacagattgtgtaaattgtctgatt
gcattcaccagtagcagattcgacaaagatatcagtctcaatgctattgatttcttgcgt
ttgtgtgcggcaaaactggctaaaggagatttaggatcctcctcaatggataaggacaaa
gaggtgtctgaaaagatatcattgtctccacattatgcaaaaaaagacagaagatatgat
aatggagatttggcagataaggaagaccatttgtacttctggtttccattactagctggg
ttgtcagaacttagctttgactcaaggcctgagattaggaagagtgcccttgaaacactc
tttgatacattacgaaaccatggtcatcacttctctctacctttgtgggaaagggtgttt
gattctgtcctatttccaatctttgattatgtccggcatgctattgatccttctggtgag
aactcttcagaacaggggattgatggtgacgtggacgagcttgatcaagactcttggcta
tatgagacatgcacacttgcactccagttggttgtggatctttttgttaatttctatgac
actgtcaacccacttttaaagaaggttctgatgttgttagtgagttttatcaagcgtcct
caccaaagccttgctggtattggaattgctgcatttgttcgtttgatgagcaatgctggg
gaattgttctctgatgacaagtggcttgaagtggtttcgtctttgaaagaggctgcgaat
gcaacacttcctgatttcttgtttcttttaagtagagatgggctaattgtgaaccatgag
gatgtttctacgagacgaagtgatgggggttctgctgaggctagcatgcgggatgaggag
ttggagaacctgtggagggaccgtttatacactgccgtttctgatgtcaagtgtcgtgct
gcggtccaacttctattgatccaggcaataatagagatttataacatgtacagacctcag
ctatcaacaaagaacaccttagttgtctttgatgcagtgcatggggtggcaagtcatgcc
cacaagataaatgccgacaccacattgcgttctaagctacaggagcttggcccaatgaca
caaatgcaggatcctccattgttacgccttgaaattgagtcctatcaaacctgcctcacg
tttctacagaaccttgcggtggaccgacctccatcttttgaggaatcaaaagtggagtct
caacttgttgacctttgccaagaagtattaaaattctatgttgaaatagcatggcctgca
cgtatgaccgggctatctcctaaccgggcccactggttgataccgttaggctctgggaaa
aagagagaactggctgcacgtgcgcctgttatcgttgcaactctacaggctatatgtagt
ttgggagactcttcatttgagaagaatttatctagctttttccctctggtttctagcctg
ataagctgcgatcatggatccagtgaggtccagatagcccttagtgaaatgctcagctcc
tcggtgggtcctgttttgctgcgatcatgttga
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