KEGG   Cynara cardunculus var. scolymus (artichoke): 112522534
Entry
112522534         CDS       T05604                                 
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2-like isoform X1
  KO
K18442  brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112522534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112522534
Membrane trafficking [BR:ccav04131]
 Endosome - Golgi transport
  Arf GTPases and associated proteins
   Arf GTPase associated proteins
    112522534
SSDB
Motif
Pfam: Sec7 Sec7-like_HUS BIG2_C DCB Sec7-like_HDS Mon2_C Phage_TAC_15
Other DBs
NCBI-GeneID: 112522534
NCBI-ProteinID: XP_024987495
LinkDB
Position
LG 12:complement(9094322..9111318)
AA seq 1790 aa
MAFSEAESRLVNKILVPALEKIIKNSSWRKHSKLAQESKLVLERITSSEKPSPTSEDSQS
DVDTSPQSPAPGVLQDSGTNELSLAESELILSPIINACSSGNVKIAEPALDCIQKLIAHG
YLRGEADPSGGPDAKLLAKLIDSVCKCHDFGEEGVELLVLKTILSAVTSVSLRIHGDSLL
QIVRTSYDIYLGSKYVVNQTTAKASLVQMLVIVFRRMEADSSTVPVQPIVVAELMEPTEK
GGDGDGTMTVFVQGFISKVIHGMDGVLNPGTRVGSNAGGGGVHDGAFETKTSTVESTNPA
DLLDSTDKDMLDAKYWEISMYKTALEGRKGELADEEVDRDDDIEVQIGNKLRRDAFLVFR
ALCKLSMKTPPKDALADPQLMRGKIVALELLKILLENAGAIFRTSERFLGAIKQYLCLSL
LKNSASTLIIVFQLSCSIFISLLSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIV
LRFLKRLCVDSQILVDIFVNYDCDVNSSNIFERMVNGLLKTAQGVSPGVATTLLPPQDIT
MKLEAMKCLVAVLKSMGDWMNHQLRIPDPHSAKKAELVDNSPEIGNPPMENGIANDRESF
EGSDSHSEASSEVSDASTIEQRRAYKLELQEGISLFNRKPKKGIEFLINVNKVGNSPEEI
AEFLKNASGLNKTLIGDYLGEREDLPLKVMHAYVDSFDFHGMEFDEAIRAFLRGFRLPGE
AQKIDRIMEKFAERYCKCNPKAFISADTAYVLAYSVIMLNTDAHNAMVKNKMSADDFIRN
NRGIDDGKDLPEEYLRSLFERISRHEIKMKEDDFALQQRQSVNSNRILGLDSILNIVVRK
NAEENQTSDDLMRHMQEQFKEKARKSESVYYAATDVFILTLMVEVCWAPMLAAFSVPLDQ
SDDEIIIAQCLEGFRCAIHVTAAMSMKTHRDAFLTSLAKFTSLHSPADIKQKNIEAIKAI
VTIADEDGNYLQDAWEHILTCVSRFEHLHLLGEGAPPDATFFSVNQNESEKSKHTKSYIL
PVLKRKGVGRLQQAAAATRRGSYDSAGIGGNTSAGITTEQVNSLVSKLNMLEQVGEMNRI
FIRSQKLNSEAIVDFVKALCKVSMEELRSTSAPRVFSLTKIVEIAHYNMNRIRLVWTGIW
NVLSDFFVTIGCSENLSIAIFAMDSLRQLSMKFLEREELTNYNFQNEFMKPFVIVMRKSS
AVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEMIEKIVRDY
FPYITETETTTFTDCVNCLIAFTSSRFDKDISLNAIDFLRLCAAKLAKGDLGSSSMDKDK
EVSEKISLSPHYAKKDRRYDNGDLADKEDHLYFWFPLLAGLSELSFDSRPEIRKSALETL
FDTLRNHGHHFSLPLWERVFDSVLFPIFDYVRHAIDPSGENSSEQGIDGDVDELDQDSWL
YETCTLALQLVVDLFVNFYDTVNPLLKKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAG
ELFSDDKWLEVVSSLKEAANATLPDFLFLLSRDGLIVNHEDVSTRRSDGGSAEASMRDEE
LENLWRDRLYTAVSDVKCRAAVQLLLIQAIIEIYNMYRPQLSTKNTLVVFDAVHGVASHA
HKINADTTLRSKLQELGPMTQMQDPPLLRLEIESYQTCLTFLQNLAVDRPPSFEESKVES
QLVDLCQEVLKFYVEIAWPARMTGLSPNRAHWLIPLGSGKKRELAARAPVIVATLQAICS
LGDSSFEKNLSSFFPLVSSLISCDHGSSEVQIALSEMLSSSVGPVLLRSC
NT seq 5373 nt   +upstreamnt  +downstreamnt
atggctttttcggaagccgaatcccgcctcgtaaacaagatcctagtcccagccctagaa
aaaattatcaagaacagctcttggcgcaagcactcaaaactcgctcaggaatccaaatta
gtactcgaacgcatcacttcctccgagaaaccctctcctacatcagaagacagtcaatca
gatgttgatacgtcaccacaatcaccagcccccggcgtcctgcaagattcaggcaccaac
gaactttccctagccgaatcagaactcattttaagccccatcatcaacgcttgctcttcg
gggaatgtcaagatcgctgaaccagcgctggattgtatacagaagttgattgctcatgga
tatttacgtggcgaagcggaccccagtggtggtcccgatgcaaaattgttagcaaaattg
atcgactcagtttgcaagtgtcatgattttggggaggagggagtggaattgttggtgttg
aagacaattttatcggcagtgacgtcggtatcgttgaggatacatggtgatagtttgttg
cagattgtcaggactagctatgatatttatctagggagtaagtatgtggttaatcagaca
acggcgaaggcgtcattagtgcagatgcttgtgattgtttttaggaggatggaggctgat
tcatcaacggtgccagtgcagccgatcgtggtggcagagctgatggagcctacggaaaag
gggggagatggtgatggaacaatgacggtgtttgttcaagggtttattagtaaagttatt
catggaatggatggggttttgaatccagggactcgggtaggatcaaatgctggtggtggt
ggggtgcatgatggggcgtttgaaaccaagacttcaactgtagagtcaacaaatcctgct
gatttgttagattctacggataaggatatgttggatgctaagtattgggagattagtatg
tataagacggcattggagggccggaaaggggaattggcagacgaggaggttgacagggat
gatgatatagaggttcagattgggaataagctgagaagggatgcgtttttggtgtttcgg
gctctttgtaagctatcaatgaagacccctccgaaagatgcattggcagacccacagttg
atgcgaggaaagatagttgctttggagttgttgaagatcttgttggagaatgctggggct
attttcagaaccagtgaacgatttttgggagccattaagcagtacttatgcctgtctttg
ctaaagaacagtgcatcgacccttataattgtatttcagctctcttgctcaattttcatt
agtctgttgtcaagatttagagcgggattgaaggcagagattggagtattctttcctatg
attgttctcagagttctagagaatgtcgctcaaccaaattttcagcagaagatgatagta
ctgcgatttcttaaaagactatgtgttgattcccagatcttggtagatatatttgtcaac
tatgactgtgatgtcaattcatccaacatttttgaaagaatggtcaatgggcttcttaag
actgcccaaggggtttcacctggagttgcaactacgcttttgccgcctcaggatatcacc
atgaagctagaagctatgaagtgcttagtggctgttttaaaatcaatgggagactggatg
aaccatcaattgcgcattcctgatcctcattctgcaaagaaagctgagttggttgacaac
agtcctgaaattggaaatcctcccatggaaaatgggattgcaaatgatcgtgagtctttt
gagggatcggattctcattccgaagcctccagtgaagtttcagatgcttcaactattgag
caacgccgggcttacaaactcgaacttcaggaaggtatctctctttttaaccgtaagcct
aaaaagggcattgaattcttgatcaatgtgaataaggtggggaattcacctgaagaaata
gcagagttcttaaaaaatgcatctggtttaaacaagactttgataggtgattatcttggg
gaaagagaagatctaccacttaaagtaatgcatgcatatgtggattcatttgactttcat
ggtatggagtttgatgaggcaattagagcctttctacggggctttaggttgcctggtgag
gcacaaaagattgatcgcatcatggaaaagtttgctgaacgttactgcaaatgcaatcca
aaggcgtttatcagtgccgacacagcctacgtccttgcctactctgtgataatgctgaat
actgatgctcataatgccatggtcaagaataagatgtcagctgacgattttataagaaat
aatcgtggcatagatgatggaaaggacttacctgaggagtatctaagatcattgtttgag
cgtatatcaagacatgaaattaaaatgaaagaagatgatttcgcccttcaacagaggcag
tctgtaaactcaaacaggattttgggtttagacagtatattgaatattgtggtgcgtaag
aatgcagaagaaaatcaaacaagtgatgatcttatgcgacacatgcaagaacagtttaaa
gagaaagcacgcaaatcggagtcagtttattatgctgcaacagatgtgtttatacttaca
ttgatggtagaggtgtgctgggctcctatgctagctgcctttagtgttcctcttgaccaa
agtgatgatgagataataatagctcaatgtctggagggatttcgttgtgctatccatgtt
actgcagcaatgtccatgaagactcatcgagatgctttcttgacatcgctggcaaagttt
acttcccttcattcaccagctgatataaaacagaagaacatcgaagctatcaaggcaata
gttacaattgcagatgaagatgggaactatctacaggacgcatgggagcatatcctgaca
tgtgtttctcggtttgaacatttgcatctattgggagagggggctcctccagatgccaca
tttttttctgttaatcagaatgaatctgaaaaatcaaaacatacgaagtcatatatcctt
cctgttcttaaaagaaagggagttggaaggcttcagcaagcagctgcagcaacgagaaga
ggttcatatgatagtgctggcattggtggtaatacttctgcaggcattacgacggagcag
gtgaatagtttggtctctaagttaaacatgctggaacaagttggtgaaatgaatcgtata
ttcattaggagtcagaaacttaacagcgaggcaatagttgattttgtgaaggcactttgc
aaggtgtctatggaggaactacgatctacatctgctccacgagtgtttagcctcacaaaa
atagttgaaattgctcactataacatgaaccgcatcaggcttgtctggacaggcatctgg
aatgtactctctgatttttttgtgactataggttgttctgaaaatctgtcaattgcaata
tttgcaatggattctttacgccaactatctatgaagttcttggaaagggaagagttaact
aattacaattttcagaatgagtttatgaagccttttgtgattgtcatgcgtaaaagtagt
gctgtggaaattagagagctgatcatcagatgtgtctctcaaatggttctatctcgtgtc
aataacgtcaagtcaggatggaaaagcatgttcatggtcttcactacggcagcttatgat
gaccacaaaaatattgtactcctcgcctttgaaatgattgagaagatagtgcgagactat
tttccttacatcactgaaacagaaaccaccacttttacagattgtgtaaattgtctgatt
gcattcaccagtagcagattcgacaaagatatcagtctcaatgctattgatttcttgcgt
ttgtgtgcggcaaaactggctaaaggagatttaggatcctcctcaatggataaggacaaa
gaggtgtctgaaaagatatcattgtctccacattatgcaaaaaaagacagaagatatgat
aatggagatttggcagataaggaagaccatttgtacttctggtttccattactagctggg
ttgtcagaacttagctttgactcaaggcctgagattaggaagagtgcccttgaaacactc
tttgatacattacgaaaccatggtcatcacttctctctacctttgtgggaaagggtgttt
gattctgtcctatttccaatctttgattatgtccggcatgctattgatccttctggtgag
aactcttcagaacaggggattgatggtgacgtggacgagcttgatcaagactcttggcta
tatgagacatgcacacttgcactccagttggttgtggatctttttgttaatttctatgac
actgtcaacccacttttaaagaaggttctgatgttgttagtgagttttatcaagcgtcct
caccaaagccttgctggtattggaattgctgcatttgttcgtttgatgagcaatgctggg
gaattgttctctgatgacaagtggcttgaagtggtttcgtctttgaaagaggctgcgaat
gcaacacttcctgatttcttgtttcttttaagtagagatgggctaattgtgaaccatgag
gatgtttctacgagacgaagtgatgggggttctgctgaggctagcatgcgggatgaggag
ttggagaacctgtggagggaccgtttatacactgccgtttctgatgtcaagtgtcgtgct
gcggtccaacttctattgatccaggcaataatagagatttataacatgtacagacctcag
ctatcaacaaagaacaccttagttgtctttgatgcagtgcatggggtggcaagtcatgcc
cacaagataaatgccgacaccacattgcgttctaagctacaggagcttggcccaatgaca
caaatgcaggatcctccattgttacgccttgaaattgagtcctatcaaacctgcctcacg
tttctacagaaccttgcggtggaccgacctccatcttttgaggaatcaaaagtggagtct
caacttgttgacctttgccaagaagtattaaaattctatgttgaaatagcatggcctgca
cgtatgaccgggctatctcctaaccgggcccactggttgataccgttaggctctgggaaa
aagagagaactggctgcacgtgcgcctgttatcgttgcaactctacaggctatatgtagt
ttgggagactcttcatttgagaagaatttatctagctttttccctctggtttctagcctg
ataagctgcgatcatggatccagtgaggtccagatagcccttagtgaaatgctcagctcc
tcggtgggtcctgttttgctgcgatcatgttga

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