Cynara cardunculus var. scolymus (artichoke): 112522537
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Entry
112522537 CDS
T05604
Name
(RefSeq) cell division control protein 48 homolog C isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112522537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112522537
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112522537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
TIP49
AAA_22
AAA_14
AAA_2
RNA_helicase
AAA_28
IstB_IS21
AAA_17
AAA_33
nSTAND3
AAA_18
Nucleolin_bd
NPHP3_N
Viral_helicase1
Rad17
Bac_DnaA
AAA_3
Mg_chelatase
Parvo_NS1
Cytidylate_kin2
ATPase_2
ABC_tran
TsaE
TTC3_9th
NACHT
NB-ARC
AAA_11
Motif
Other DBs
NCBI-GeneID:
112522537
NCBI-ProteinID:
XP_024987501
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All DBs
Position
LG 12:complement(10352693..10360812)
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AA seq
877 aa
AA seq
DB search
MGKAGKSPATSSVFERVLRRRVHETFGNATPSFDEIVDRLRATFPEYGRHKLQPFTRMVK
QALDSSNSKEKKKSRRNDDDDRRSIFNDDDDGTSPSLRSPASKKAKKIDSREQRLQMLEM
KHVARRRIKLQSTSESSDSSSSDVEEDRSAVSTSDNEVYSLQFEPEFDLTKSMLRNKYSG
SKIDGKVDEKRKNVELEVVTNSNNKVNTKVDLMKEDRRVKPVVKAKAQKQKNLSNDDGVD
DNGKDDGPRFKDLGGMDVVLDELKMEVIVPLYHPQLPRSLGVRPMAGILLHGPPGCGKTK
LAHAIANETGVPFYKISATELVSGISGASEENIRELFSKAYRTAPSIVFIDEIDAIASKR
ENLQREMERRIVTQLMTCMDESHRIAKPDDTPKNAKTSDGKPGYVLVIGATNRPDAVDPA
LRRPGRFDREITLGVPDENARVQILSVLTRNLKLEGAFDLVRISRATPGFVGADLAALVN
KAGNLAMKRIIDGRKLELSRESTDTEPNEDWWRKEWTSEEMEKLSITMYDFEVATKLVQP
SSRREGFSSIPNVKWEDVGGLDLLRREFDRYIVRRIKYPDEYEQYGVDLETGFLLYGPPG
CGKTLIAKAVANEAGANFIHIKGPELLTKYVGESELAVRTIFSRARTCSPCILFFDEVDA
LTTMRGXEGGWVVERLLNQVSKIYAHCSSVSFHHRISLCLILVYLRDDSSLYLQLLIELD
GADQRKGVYVIGATNRPEVMDRAVLRPGRFGKLLYVPLPNQEERGLILKALAXKKPLDAD
VDLFAIGRSEACANLSGADLSALMNEAAMAAVEEKFMRCEAATAAAXEGXSVSSPESSLE
HTIKAIHFEQALRKISPSVSDKQKEYYHRLSESFKAT
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagcaggtaagtcgccggcgacgtcgtcggtgttcgagagagttctacgccgc
cgggtacatgaaaccttcggcaacgccactccatccttcgacgaaatcgtcgaccgcctc
cgtgccacttttcccgaatacggtcgccacaagctccaacctttcaccagaatggtgaaa
caagccctagattccagcaacagcaaagagaagaagaaatcaagaagaaacgatgacgat
gaccgtcgatctatattcaacgatgacgatgacggcacgtcaccgtcgctacgcagtccc
gcgagcaaaaaggcgaagaagattgatagcagagagcagcgattgcagatgttggagatg
aagcatgttgcacggagacgaattaagctacaatcaacctctgagtcttcggattcgtct
tcttctgatgtagaagaagatagaagtgccgtttcgacctccgataatgaggtttatagc
ctgcaatttgaaccagagtttgacttaacgaaatcgatgctcagaaacaagtacagcggg
tcaaaaattgatggaaaagtcgatgaaaaacgtaaaaatgtggagttagaggtggttacc
aatagcaacaataaggtaaatacaaaagttgatttgatgaaggaagatagaagggttaag
ccagtggtaaaagctaaggcacagaaacagaaaaacttgtcaaatgatgatggtgttgat
gacaacgggaaagacgatgggccgaggtttaaggacctgggtggtatggatgtagtcttg
gatgagttgaagatggaggtgattgttcctttatatcatccacagctaccacgaagcctc
ggagttaggccgatggctggtattttgttacacgggccgcctgggtgtgggaagactaaa
ctggctcatgccattgctaatgagactggagttccattttataagatttctgccactgag
ttggtctctggtatatcaggtgcatcagaagagaatatacgagagttgttttctaaagca
tacagaactgcaccgtctatagttttcattgatgagattgatgcaattgcttcaaaaaga
gagaaccttcaaagggagatggaacggcgcattgtgacacaactgatgacttgtatggat
gaatctcacagaattgctaaaccagatgatacgccaaaaaatgcaaagacatctgatggc
aaaccgggatatgtcttggttataggcgctactaatagacctgatgctgttgatccggca
ttaagaaggcccggacgttttgaccgagagattactttaggtgttccagatgaaaatgct
agagtgcagattctttcggtgcttacacgcaatttgaagcttgaaggtgcttttgatctt
gtcagaatttctagggccactccaggatttgtcggagctgatttagcggcattggtgaac
aaagctggtaaccttgctatgaagagaatcatcgatggaaggaagctagagctttctaga
gaaagtacagacacagaaccaaatgaagattggtggaggaaggaatggacttctgaagag
atggaaaagcttagcatcacaatgtatgattttgaggtagcaaccaaattggttcaaccc
tcttctagaagagaaggattctctagcatcccaaatgtcaaatgggaagatgttggaggt
cttgatttattgagaagggagttcgaccgttacatagttaggcgtataaaatatcctgat
gagtatgagcaatatggagtagatttggagacgggttttttgctatatggacctcctggt
tgtggaaaaacattaattgccaaagctgttgctaatgaagcaggggcaaatttcatacac
atcaagggtcctgagcttctgactaaatatgtcggtgagagtgaattggctgtgcggacg
atattcagtcgtgcaaggacatgttctccatgcatactattctttgatgaggtagatgct
ctgacaacaatgcgcggaarggaagggggatgggttgttgagcgactcctgaatcaggtt
agcaaaatttatgctcattgttcatcagtatcattccatcacagaatttcattatgcctg
attttagtgtacttgagagatgacagctctttatatttgcagctattgatagagctagat
ggtgctgatcaacgcaagggtgtttatgtaattggtgccaccaacaggccagaggtgatg
gaccgagcagtcttacggcccggaagatttggaaaactattgtacgtgcctctgccaaat
caagaagagcgagggttgatcttgaaagctcttgctkggaagaagcctctagatgccgat
gtggatttatttgctattgggcgtagtgaggcttgtgcaaatttaagtggagccgatctt
tctgcattgatgaacgaagctgccatggcggctgttgaagagaaattcatgagatgtgaa
gctgcaactgctgctgctcktgaagggaratcggtatcatcaccagaaagctctttagaa
cataccattaaagctatacattttgagcaagcattgagaaaaatctcaccttctgtctca
gataagcaaaaagagtactaccatcggctgtccgagagctttaaagcaacttaa
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