Cynara cardunculus var. scolymus (artichoke): 112522546
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Entry
112522546 CDS
T05604
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112522546
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
112522546
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
112522546
NCBI-ProteinID:
XP_024987508
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All DBs
Position
LG 12:complement(2514186..2532320)
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AA seq
1619 aa
AA seq
DB search
MLRTPTTSSCGGSGGIPLTITTSAQSPNPSDMGDQSHHRSSASRAFQFHPARPAIVDLFN
LYLGRNGRHKSDDLIREPPNKTQKRVTALNRDIPPCNGQFLSDFQQLQNQFPDHDQLRTV
VESVLVSLVIQCSGHAPRAEFILFALNGLYSVGYICWDSFLPSLLSSVTSAEMSVGISSA
ASPQPAVSSTSLSNAGMLPSSAVALNFSNFQSPNPESPLISVHGIGSPSQSANEPSCTAL
SPVKSSDINSTGQQAAARGNMSRRDSAISTLRKLSCEIIFSALEANLKPTTHADIFYHML
NWLVNWDQWQQGSDEVDGVKSLKREKALFEWLHKCLDVVWMLIEDNKCRIPFYELLRSGL
QFIENLPDDEALFTLILEVHRRRDMMAMHMQMLDQHLHCPTFGNQRLLCQAAINMLGEST
ANLRYSPITYPSVLGEPLHGEDIAFSIERGSLDWDRAMRCIRHALRNTPSPDWWRRVLLV
APCHRVHSQGPTPGAVFSSDMICEATIDRVIELLMLTNTDANCWQEWLIYSDVFFFLMKS
GCIDFVDFVDRLVLRISEEDHQILRTNHVTWLLAQIIRAELVMSALNTDSRKMETTRKVL
SFHKEAISSVSSNPQSILLDFITSCQTLRIWSLNSSTREYLNSEQLHKGKQIDEWWRQVS
KGDHMMDYMNLDDRSVGMFWVVSYTMAQPACEMVMTWLTSAGHAELPGPNLQANEKISVM
REVNPVPVSLLSGFSINLCLKLAFQMEDAMFSGQYVPNIAMVETYTRLLLIQPHSLFRSH
LSHLHQRNSETFNKPAATLLMLEILNYRLFPLYRYQGKSKTLMYDVTKILSTLKGKRGDH
RVFRLAENLCMNLIMSLREFFFVRREGKGPTEFTETLNRVTVVTLAIIIKTRGIADAEHL
LYLQTMLEQILATSHHTWSDKTLCYFPAVLRDALIGRTDKRDLAIQAWQQAEATVIHQCT
QLLSPPDDPTYVMTYISHSFPQHRQYLCAGAWVLMRGHPENINSANLGRVLREFSPEEVT
ANVYTMVDVLLHNIQLDLQHGHSLQDLILNACANLAHFIWNHELLPPDILLLALIDRDDD
PHALRIVVNLLERQELQQRIKFYVANHDNPEHWLQNGIFKRIELQKSLGHHLSWKERYPT
YFDDIAARLLPVIPLIIYRLIENDATDVADRVLQLFSSFLRYYPLNFTFVRDILAYFYGH
LPGKLIFQILNVLDIKKMPFSESFLQRVNSSNAICPPLEYFASLLSGLVANVIPPLCNLK
GEGSNQSGSTNAFECQKPFYQIQDPGTYTQLILETAVIEILSLPVTPAQIVSAFVQIIVH
IQPTLIQSNHSFHESSNSSESCSALATSPSGGITDFLDGRRSNPSTTELDLPDFVSQSGY
TYQKLSCVLIQACGLLLAQLPAEFHIQLYAEASRVIKESWWHADGGRSTIELDSAVGYAL
LDPTWAAQDNTSTALGNMVALLHAFFSNLPQEWLDKTHLLINNLRPVSSIAVLRIAFRII
GPLLPRLANAHSLFTKTLELLLSMMVDVFGRNSQPSPPVEASDITDLIDFLHHIVHYEGQ
GGPVQPNSKPKPDVLGLCGRAIENLRKDVQHLLSHLKTDGNCSIYAAAATNPKLSQNLS
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgttaagaactccgacaactagtagctgcggcggcagcggtggtatccctttaacaatc
accacctccgctcaatcaccaaatccgtcggacatgggtgatcagagccaccaccggtct
tctgcgtcgagagctttccagtttcaccccgccagacccgccatcgtggacctctttaac
ctctatctcggtagaaatggccgccataaatcagatgatttgatccgagaacctccgaat
aagacacagaagagagttactgctctgaatagagatattcctccatgcaatggacaattt
ctttcagattttcagcagcttcagaatcagtttcctgatcatgaccaattgcgtactgtg
gtggaatctgtgcttgtgtctctggttatccagtgtagtggtcatgcaccgagagcagag
tttattctttttgctttgaatggtttgtacagtgttgggtacatatgttgggattctttt
ctaccatctcttctttcttctgtcacctctgcagagatgtcggtgggtatctcttctgca
gcttcgccacagcctgctgtttcttctacgtctttatcgaacgctgggatgttaccatcg
tctgctgtggctctcaatttctctaattttcagtctccaaatccggaatctcctttaatt
tcagttcatggaattggatccccatctcaatcagcaaatgaaccatcatgtacagctttg
tcgcctgtaaaatcatccgatatcaacagcactggacagcaggctgcagcaagaggtaac
atgtctaggagagattctgccataagtactctgcgtaagttatcttgcgagataatattt
tctgccttggaagccaatttaaagccaactacccatgctgatattttctatcacatgcta
aattggctggtaaactgggatcaatggcaacaagggagtgatgaggttgatggagtaaaa
tctttgaaacgggaaaaggccttatttgaatggctacataagtgtttagacgtggtttgg
atgctgattgaggataacaaatgccgtatacccttttatgagctattgcgaagtggacta
cagtttatagaaaatctacctgatgatgaggcactctttacactcattttggaggttcac
aggagacgagatatgatggccatgcacatgcaaatgttagatcagcatcttcactgccct
acgtttgggaatcaacgtcttctgtgtcaggctgcaattaatatgttaggtgaatcaact
gcaaatctaagatactcacctattacatacccaagtgtgcttggagaaccgttgcatggg
gaggatattgctttctcgattgagagaggaagtcttgattgggatagagctatgcgttgt
attaggcatgcccttcgaaatactccatcacctgattggtggaggcgtgtgcttcttgtg
gcaccttgtcatcgagtgcattcacaaggaccaactccaggtgctgtctttagttctgac
atgatctgtgaggcaaccattgacagggttattgaactcttgatgcttacaaatacagat
gctaattgctggcaggagtggcttatctattcagatgtgttcttttttctcatgaaaagt
ggttgcatagattttgttgattttgtggacaggttagttttacgcataagtgaggaagat
caccaaattctgaggacgaatcacgtcacatggttgcttgcgcagattattcgggctgag
cttgtaatgagcgctttaaacacagattcaagaaagatggagacgaccagaaaagttttg
tcatttcataaagaagctataagctcggtttccagtaacccccaaagtatcctacttgac
ttcattaccagttgtcagacccttcgcatttggtcactgaattcatcaaccagagaatat
ttaaatagtgagcagcttcataaaggaaagcaaattgatgaatggtggaggcaagtaagt
aaaggggatcatatgatggactatatgaatttggacgacagatcagttggtatgttttgg
gttgtgtcttacactatggcgcaacctgcttgcgagatggtgatgacttggttaacatct
gctgggcatgcagaattaccaggaccaaatctacaggctaacgagaaaatttcagtgatg
cgggaggttaatcctgtaccagtatcactgttgtcaggattttcaattaatttgtgtctg
aaactggctttccagatggaagatgctatgttttctggacagtatgtacctaacattgcc
atggtcgaaacatatactaggttgctgcttattcaacctcattcattgttccgctcacat
ttaagtcatctgcatcagaggaattctgaaacttttaataagcctgcagctacactttta
atgcttgaaattctcaactatcggttatttcctttatacaggtaccaagggaagagcaag
acattgatgtatgatgttacgaaaattctctccacactaaaaggcaagcgtggtgatcat
cgtgtatttaggttggctgagaacctgtgcatgaatctcattatgtcgttgagagaattc
ttttttgtgaggagggaagggaagggacctactgagtttacagaaacattgaatcgtgta
actgtagtgactcttgctattatcattaagacacgtggaattgctgatgctgagcacctt
ttatatcttcaaacaatgttagaacaaatattggctactagccatcacacatggtcagac
aagaccctctgttactttccagctgttctacgtgatgccttaattgggaggacagacaag
agggacctagcaatccaagcatggcaacaggcagaagcaactgtgatccatcagtgtaca
cagcttctctcaccaccagatgatcccacttatgtcatgacttatataagtcacagtttt
cctcaacaccgacaatatctctgtgctggagcgtgggtactgatgcgtggacaccctgag
aacattaacagtgcaaacctgggacgcgtgcttagagaattttcccccgaggaagtgact
gcaaatgtgtataccatggtggatgtccttctgcataatattcagttggacctacaacat
ggacattccttgcaggatcttatattaaatgcctgtgcaaatctcgcacactttatttgg
aaccacgagttgctgcctccagatattttgcttctggcgctaattgaccgtgatgatgat
ccccatgctttgcgtattgtggttaatttacttgaacgacaagaacttcaacagaggata
aagttttatgttgctaatcatgacaatccggagcattggcttcaaaatggaatatttaag
cgtattgaattgcagaagtctcttggccatcatttgtcatggaaggaaaggtacccaaca
tattttgatgatattgcagcacgtttactccctgtcatccccttaatcatttatcggcta
attgaaaatgatgccaccgacgtagctgatagagttctccaattgttttcatctttcctt
cgttactatcctttgaattttacattcgtacgtgatatacttgcatatttctatggacat
cttccaggaaagctcatctttcagatactgaatgtacttgatataaaaaagatgccattt
tcagagtcatttttacagcgtgtcaattcgtcaaatgccatatgtccaccattggagtac
tttgcatctcttttatcaggtcttgtggctaatgtcatccctcctctatgtaacttgaaa
ggggagggttcaaatcagtctggatcaacaaatgctttcgaatgtcaaaagccattctat
cagatacaagatcctggcacatatacccaactaattcttgaaactgcagttatagaaatc
ctctctctccctgtaactccggcacagattgtttcggcatttgtacagattattgtccac
atacaaccaactcttattcagtctaatcatagcttccatgaatcatcaaatagttcagaa
tcatgttctgctttggcaacttccccatcaggaggaatcaccgattttttagatggtcgc
agatcaaatccttcaactacagaactagaccttccagattttgtttcacagagtggttat
acgtaccagaagttgtcttgtgtgctgattcaagcttgtggtctcctgttggctcagctt
cctgctgaattccacatacagctttatgcagaggcttcacgtgtcatcaaagagagttgg
tggcatgcagatggagggcggtctactattgaactagattctgctgttggttatgctttg
ttggatccgacatgggctgctcaagacaatacctccactgcccttggaaatatggtggcg
ttgctccatgctttcttcagtaatcttccacaggaatggctagataaaacacacctcctt
ataaacaacctaaggcctgtttcctccattgcagtgctgagaatagcctttcgcataatc
ggtccactgctgccaagattagcaaatgctcatagtctcttcactaagactcttgaactg
cttttaagcatgatggtggatgtgtttgggaggaatagtcagccatcacctcctgttgaa
gcatcagatataacagatcttatagacttccttcaccatattgtgcattacgaaggacag
ggagggcctgtacagccgaattctaaaccgaaacccgatgtattgggtttatgtggaaga
gcgattgaaaacttgcgaaaggatgtacagcatcttctttctcacttaaaaaccgatggg
aattgttcgatttatgctgctgctgctacgaatccgaaactgtctcagaatctatcctga
DBGET
integrated database retrieval system
