Cynara cardunculus var. scolymus (artichoke): 112522581
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Entry
112522581 CDS
T05604
Name
(RefSeq) probable galacturonosyltransferase 4 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00520
Amino sugar and nucleotide sugar metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112522581
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112522581
Enzymes [BR:
ccav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
112522581
Glycosyltransferases [BR:
ccav01003
]
Polysaccharide
Structural polysaccharide
112522581
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
HrcA
Motif
Other DBs
NCBI-GeneID:
112522581
NCBI-ProteinID:
XP_024987565
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All DBs
Position
LG 12:complement(36242485..36246975)
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AA seq
640 aa
AA seq
DB search
MKTRLRKPVLVLLFLTVIAPIVLYTDRLASFTSFSATDEFIQEPSTLSLNRDAIPLSLLP
QELSAAKKESSGDVYLENLTRSVQQPDGERSRKTRQLTEVLSESKELGTIVSAQDDNPIR
QLTQGLHGVDGSENGFESVENKENVKLKETKQEGQFIELPQKVGERGPAKTKSEKPNERV
LVDSRVRYLKDQLIRGRLYLSLSATRTNVHFIRELRLRMKEVQRVLGDATKDADLPKSAS
DKLKAMEQTLAKGKQIQDDCTAVVKKLRAIIHSTEEQQRVHKKQALFLTHLTAKTVPKGL
HCLPLRLSTEYYSLNSSAQQFSNQEKLEDPKLFHYALFSDNVLATAVVVNSTVSSAKDSS
KHVFHIVTDRLNYAAMRMWFLANPPSKATIQVQNVEEFTWLNASYSPVLKQLASQNMIDY
YFKTRRAEPDSNLKFRNPKYLSIMNHLRFYLPEIFPKLSKVLFLDDDIVVQKDLTGLWSL
DLKGKVNGAVETCGESFHRFDRYLNFSNPIIAKNFDPRACGWAYGMNIFDLEEWKKQNIT
EVYHSWQNLNQGRQLWKLGTLPPGLITFWKRVYPLEKSWHVLGLGYNPSVSQREIERAAV
IHYNGNLKPWLEIGIPKFRGYWNRFVDYEQAYMRDCNMSP
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgagactaaggaagccagtgctggtgttgcttttcctgacggttattgctccc
attgttctttacactgatagactcgcttcatttacttccttttcagctacagatgaattc
attcaggagccttcaacactttcgttgaatcgagacgccatccccctaagtttgcttcca
caggagttatctgcagcaaaaaaagaatcatcaggtgatgtttatttggaaaatttgact
agatctgttcaacagcctgatggtgaaaggtccaggaagactagacagcttactgaagtt
ttatcagaatcaaaggaacttggcaccattgtttcggctcaagacgacaaccccatcagg
caattgactcaagggttgcacggagtcgatggcagtgagaacggatttgaatcggtcgaa
aacaaggaaaatgtgaagttaaaggaaaccaaacaagagggacagttcatcgaacttcct
cagaaagttggtgaaaggggacctgcaaaaaccaaaagcgagaaacccaatgaacgtgtt
ttggtagattctcgtgttcggtatctgaaggatcaattgattaggggaagactttacctt
tctctttcagcaacgaggaccaatgttcattttattagggaacttcggttacgtatgaag
gaagtccaaagagtacttggtgatgcaaccaaggatgcagatctaccaaaaagtgcctca
gacaagctgaaggcgatggagcaaacgttggcaaaaggaaagcaaatacaggatgactgc
actgctgttgtaaaaaaactccgtgctattattcactcaaccgaggaacaacagcgggtc
cacaagaaacaggccttgtttttgactcacttaactgccaaaactgttcctaagggtctc
cattgtcttcccttacgcctttcaaccgaatactattctttaaattcttctgcacagcaa
ttctcaaatcaagaaaaactagaagaccccaagctgttccactatgcactgttttcggat
aacgtgttagctacagcagtagttgtgaattcaactgtttctagtgccaaggattcttcg
aaacatgtgttccacattgtcactgataggctcaattatgctgcaatgaggatgtggttt
cttgcaaacccacccagcaaggctacaatacaagtgcagaacgttgaggaatttacatgg
ctaaatgcgagttacagcccagttctcaagcagttggcttcacagaacatgattgattat
tatttcaaaacacgtagggctgagcctgattcaaacctgaagttccgcaacccaaagtat
ctgtcaattatgaatcatcttcggttttaccttccggagatctttccaaagcttagtaaa
gtgctgttcttggatgatgatatagtggtccagaaggatttgacaggtctttggtctctt
gatctgaagggcaaggtgaatggtgctgttgagacctgtggggaaagcttccatcggttt
gaccgatatctcaacttctcaaatcctatcatagctaaaaattttgatccccgtgcttgt
ggttgggcgtatggaatgaatatatttgatttggaggaatggaagaaacagaatatcaca
gaagtttatcattcatggcaaaatttgaatcaagggagacaactgtggaagttgggaacg
ctaccacccggtttgataacattttggaaacgtgtatacccactagagaagtcatggcat
gtacttgggctggggtataatccaagcgtgagccagagggagattgaaagagctgcagtg
attcactacaacgggaatttgaaaccatggctggagataggaattcccaagttccgagga
tactggaacaggtttgttgactacgagcaggcatacatgcgggattgcaatatgagtcca
taa
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