Cynara cardunculus var. scolymus (artichoke): 112522606
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Entry
112522606 CDS
T05604
Name
(RefSeq) GTP-binding protein YPTM2-like
KO
K07874
Ras-related protein Rab-1A
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112522606
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112522606
04031 GTP-binding proteins [BR:
ccav04031
]
112522606
Membrane trafficking [BR:
ccav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
112522606
Autophagy
Other autophagy associated proteins
112522606
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112522606
Exosomal proteins of other body fluids (saliva and urine)
112522606
Exosomal proteins of colorectal cancer cells
112522606
GTP-binding proteins [BR:
ccav04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
112522606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
Gtr1_RagA
MMR_HSR1
SRPRB
G-alpha
LANC_like
NolB
AAA_29
Septin
AAA_16
PduV-EutP
AAA_22
Motif
Other DBs
NCBI-GeneID:
112522606
NCBI-ProteinID:
XP_024987612
LinkDB
All DBs
Position
LG 12:complement(9741994..9746679)
Genome browser
AA seq
203 aa
AA seq
DB search
MTPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRFASENVNKLLVG
NKCDLVKNKVVSTEVAKAYADEIGIPFMEASAKEATNVEQAFMAMAASIKDRMASQPSMN
MSRPPTVNIRGQPVNQSSGCCSS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgagtatgactacctgttcaagcttttgcttattggagattctggagtagga
aaatcatgtctactcctgaggtttgctgacgattcctacttggatagttacataagcacc
attggagttgattttaaaatccgtaccgtggaacaagatggcaagaccattaagcttcaa
atttgggatactgcgggtcaagaacgttttaggacgatcacaagcagctactaccgcgga
gcacacggcattatagtggtttatgatgtgacagatcaagaaagctttaacaatgtcaaa
cagtggctgagtgaaatcgatcgttttgccagcgaaaacgttaacaaacttcttgttggg
aacaaatgtgatctcgttaagaataaagtcgtgtcaaccgaagtagccaaggcatatgct
gatgaaattggaatcccattcatggaagcaagtgcaaaagaggccaccaatgttgaacag
gctttcatggccatggctgcttcaatcaaagataggatggcaagtcaaccttcgatgaat
atgtcgaggcctccaacagttaacattcgtggacagcccgttaatcagagtagcggatgc
tgctcatcataa
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integrated database retrieval system
