Cynara cardunculus var. scolymus (artichoke): 112522619
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Entry
112522619 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112522619 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112522619
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112522619
Surveillance factors
Other surveillance factors
112522619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
112522619
NCBI-ProteinID:
XP_024987628
LinkDB
All DBs
Position
LG 12:complement(76143..87259)
Genome browser
AA seq
1584 aa
AA seq
DB search
MAEGKLDLSDDLLSSKPSDHSWTSKVEASGGNGEDKITGYDSKDQAALDSSIPLSPQWLY
AKPGESKMEMRAPSSLSLGSSADSNLKEAWRSDGSEDKKDWRKTGIEAESGRRWREEERE
TGLLGRRERRKTDRRVDVGRDTPDNRAPPSDRWLDVGNRSAGHEARRDSKWSSRWGPDEI
EKETRTEKRTDAEKEDAHGDTQAHASSTRVVSERDPDSREKWRPRHRMEANSSGPGSFRA
APGFGIEKGRAEGSNMGFTVGRGRSSASVVRPSSASSIEKNEGVPGKPGIYVDMFFYPRG
KLLDIYRRQKLDPSFAKMPEKIEEIPSITQITAVEPLAFVAPDAEEEAILGDILKGKISS
SEVVDNSIKNVGSSENIADVWHLTSTNSKDDALPPMEDMFDPNQNPSQTVADSTSRLDGQ
RTRTREGRDANWDQEQRVPEMVSQMDSYALKTRSNISITGTSHDEASNHDVADFTSMGHQ
HNDNVHPSSFDISSKLNDSNSLFATPSSEQYWTRDMQPSENSLNEHLTRGIQPEELSLYY
RDPQGEIQGPFLGVDIISWFEQGFFGADLPVRVADAPEEAPFLELGDVMPHLNTRHDYTT
SNDPSPNLEISDGFEGNFDARVSVPAPVSEMGCQSALDNQHWQLPEFNGLPIKHAQARIP
EHEGPLPLLYEGQNFHDEEIVFPGRPGSSDSSVNYMKNHTVPTDFTEPGIQNKSDNRSHP
LGLLWSELEGSSLRNDKASKAPFTGGVQQQLVNPPSQRVSPFNAMPDCIHAADAWPDIYR
RNALSDPNLYKDAMDARQLTHMDQEASDFDLSEKLRSHQIQQQLLQQHNLLASHPHLNDL
MLDQVQGRGPINPQHLAGQTGQDLDRFLALQLQQQQRRIELHQQHQLNQQQMLLKEQQSR
QLLLEQLAQNQMRDGRGQSRADVARSNNALDQIILKHQILNELHQRSQRHPQNVDPSIEH
LVQAKYGQLPHQGHPNDLLELIAHAKHGQMPSLEHHMLQHEQFHGRQLPMGLRQRIEMEE
ERRLGSAWSLDETTQFLRNSGGLHRANSAGLSPLDLYKQQRLSPDELNHLERNLSLQERL
QQGAYDPSLLSFERSMPGGGSLMNFDVNSMAQAQKLDMQEFNAPLHHANQVGGFSSGILS
HQSQHPMVSNHFHPSHLGAMEGPWSESNGQMPNDWIESRIQQLHVDNGRHKREMEMRRIS
EDPSLWMSAGTNDDPSKRLLMELLHQKPDSQSNEILGVNNVGPFESAEPFGSYSAMNSNH
SFNLLNQEVGLNHPFSVASYGPNSGTGQQARLVDETVLGLEGKDRMLSRSSSGVMHEESP
FFSDVNESSQVAYSNSSMVGMSSIERGLFDVEGKRRLLKSEGSMVKGVAAETQEAIIQQC
GDTDLDDAEMPNNIGRHASPAIGGNKSLYNDKVGSPETFAEAKDRVTLTSKRSDNILLKR
PPVSRASSSHEGLCELASDSTFRGKNVSSMSVPEGGREILTNQVSENMIGGKKDVRFRRT
SSFSDADVPETASFSDMLKSNVKKPPLPDTHATASASEGGAVDGHGGKTGKKKGRKGRQI
DPALLGFKVTSNRIMMGEIQRIED
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggcaagcttgatctttccgacgatcttctctcttcgaaaccctccgatcat
tcttggacatctaaagtggaagcttctggagggaatggtgaagataagataactggatat
gattccaaagatcaagcagctttggacagcagcatccccttgtctccccagtggctctat
gctaaaccaggcgagagtaagatggaaatgcgtgcaccaagttccctctctcttggaagt
tctgctgattccaatttgaaggaggcttggcgttcagatggatctgaggacaagaaagat
tggaggaaaactggaattgaagcagaaagtggtcgccgctggcgtgaagaagaaagagaa
acaggcttacttggtagaagagagcgcaggaaaactgatcgccgtgttgatgtgggtaga
gatacgcctgataatagagcacctccctctgataggtggcttgatgttggtaaccgcagt
gctgggcacgaggcacgacgtgacagtaaatggtcatctaggtggggtccagacgagata
gaaaaggaaacacggactgagaagaggacagatgcagagaaggaagatgctcatggtgac
actcaagcacatgcaagtagcacaagagtagtttctgagcgtgatccagactcccgtgaa
aaatggaggccgcgccatagaatggaggcgaattccagtggaccaggttcctttcgtgca
gcacctggatttgggattgagaaaggacgggccgagggatcaaatatgggatttactgtt
ggacgtggcagatctagtgcttctgttgtaaggccttcatctgcaagttccattgagaaa
aatgaaggcgtccctggcaagccaggtatttatgtggatatgttcttctatccaagggga
aagcttcttgatatataccgtaggcagaagcttgacccttcttttgctaaaatgcctgaa
aagatcgaggaaataccttctattacacaaataactgctgtggaaccccttgcttttgtt
gctcctgatgcagaagaggaggctatccttggtgatatattgaaaggaaaaatcagcagt
agcgaggtggtggacaattcaataaaaaatgtggggtcatctgagaatattgcagatgtc
tggcatttaacatccaccaatagtaaagatgatgctcttcccccgatggaggatatgttt
gatccaaatcagaatcctagtcaaacagttgctgatagcacttcacgccttgatggtcaa
agaacgagaacaagagaaggacgagatgctaattgggatcaagagcaaagagtccctgag
atggtttcacaaatggattcatatgcactgaaaacaaggtcaaacatcagtattactggt
accagtcatgatgaagcttctaatcatgatgttgcagatttcacttctatggggcatcag
cacaatgataatgtccacccatcttcatttgatatcagctcaaagcttaacgattctaat
tctttatttgctaccccatcttccgagcaatattggacaagagatatgcagccttcagag
aatagtttgaatgaacatttaaccaggggtatccaacccgaggagttaagtctttactat
cgtgatcctcaaggggagatccaaggaccatttcttggtgtagacatcatttcatggttt
gagcaaggattttttggggcagatttgccagttcgagtggcagatgcaccagaggaagct
cctttcttggaattaggtgatgtcatgccacacttaaacactaggcatgactacaccacc
agcaatgatccaagtcccaacttggaaatttctgatggttttgaaggaaactttgatgct
agagtttctgtgcctgctcctgtgtctgaaatgggatgtcaatctgcattagataatcag
cactggcagttgcctgagtttaatggtttgccaataaagcatgctcaagcaagaatacct
gagcatgaaggccctttgccgcttttatatgagggtcaaaacttccatgatgaagaaatt
gtttttcctgggaggcctggtagcagtgattcttcagtaaattatatgaaaaaccacact
gttcccaccgatttcactgaaccaggcatacaaaataagagcgacaatagatcgcatcct
ctggggttgttatggtctgagcttgaaggatcaagtttaaggaatgataaggcatctaaa
gcacctttcactggtggtgttcagcagcaacttgtgaaccccccaagtcagagggtctcc
cctttcaacgcaatgcctgattgtattcatgctgctgatgcatggcctgacatttataga
aggaatgcactttctgatcccaacttatataaagatgcgatggatgctcgccagttgaca
cacatggatcaagaggctagtgactttgatctatcagagaaacttaggtctcatcaaatt
caacaacagctgctccaacagcataatctgctggcctctcatcctcacttgaacgatttg
atgctggaccaagttcaaggtcgagggcctataaacccacaacatttagccggtcaaaca
gggcaagatctagatcgctttttggcacttcagttgcaacagcagcagaggagaattgag
cttcaccagcagcatcagttgaatcaacagcaaatgctacttaaggagcagcaatctcga
caattgcttcttgaacagttggcccaaaatcagatgcgtgatgggcgtggacaatcacgt
gccgatgttgcaagatccaataacgcgcttgatcagattattttgaagcatcagatttta
aatgaattgcaccagcgatcacaacgccacccacaaaatgttgacccatcaatagaacat
ctggttcaagcaaagtatggccagctgcctcatcaagggcatccaaatgatctcctggag
ctcatagcacatgcaaagcatggacaaatgccgtctttggaacatcatatgcttcagcat
gagcagtttcatggaaggcagttgcctatgggtttaaggcagagaattgagatggaagaa
gagaggcggcttggttctgcctggtctttagatgaaacgactcagttcctaagaaattct
ggtggtcttcaccgagctaattctgctggcctcagtcctttagatctttacaagcaacag
agactatctcccgatgagttgaatcatcttgagcggaatctttcattacaagagcgactt
cagcaaggtgcttatgatcctagcttactatcatttgaacgctctatgcctggtggtggc
tcactgatgaattttgatgttaattctatggctcaagcccagaagttagatatgcaggag
tttaatgctccgttgcaccatgctaaccaagtaggcgggttctcttcagggatcctctcc
catcaatctcagcatcccatggtctctaatcacttccatccctcacatttgggtgctatg
gagggaccttggtctgaaagtaatggacagatgccaaatgactggatcgagtcgaggatt
cagcagctgcatgttgataatggaaggcataaaagagagatggaaatgagaaggatttca
gaagatccaagtctttggatgtctgctggaacgaatgatgacccctcaaagaggttgctt
atggaactacttcatcagaaaccagatagtcagtcgaatgaaattttgggtgtaaataat
gttggaccatttgaaagtgccgaaccttttggatcttattctgcgatgaactccaatcat
tcattcaacctcttaaatcaagaagtagggcttaatcacccattttctgttgcatcttat
ggccctaactcaggcactggccaacaagcacggttggtggatgagacagtattaggtttg
gaaggcaaggatagaatgctctcgagatccagttctggagtaatgcacgaggagagtcca
ttcttttctgatgttaatgaatcctctcaggtagcatattcaaactccagcatggtggga
atgtcgtctatagaacggggattatttgacgtagagggcaaaaggagattacttaaaagc
gaaggtagcatggtgaagggtgtagctgcagaaactcaagaagctatcattcagcagtgt
ggtgatactgatttagacgatgccgaaatgccaaataatattggcaggcatgcctcacct
gccattggtgggaataaaagcttgtacaatgacaaggttggatctcccgagacttttgca
gaggctaaagatcgggtgaccttgacatccaaaaggtctgataatattttgctgaaacgt
ccaccagtctcacgggcatcatcatcccatgaagggttatgtgagctggcgtctgattcc
actttcagagggaagaatgtctccagtatgtctgttcctgaaggtggaagagaaattttg
acaaaccaagtctctgaaaatatgattggtggcaagaaagatgttcggtttaggagaaca
tcatccttcagtgatgctgatgtaccggagactgcttctttcagtgacatgcttaaaagc
aatgttaagaagccacctttgccagatactcatgcaacagcttcagcttcagagggcggt
gctgtagatggacatgggggcaaaactggtaaaaagaaaggtagaaaagggaggcaaatt
gacccagctctgcttggttttaaggttactagcaatcgaattatgatgggcgagatccaa
cgtatagaggattga
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integrated database retrieval system
