Cynara cardunculus var. scolymus (artichoke): 112522656
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Entry
112522656 CDS
T05604
Name
(RefSeq) UDP-arabinose 4-epimerase 1-like
KO
K12448
UDP-arabinose 4-epimerase [EC:
5.1.3.5
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00520
Amino sugar and nucleotide sugar metabolism
ccav01100
Metabolic pathways
ccav01250
Biosynthesis of nucleotide sugars
Module
ccav_M00997
UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112522656
Enzymes [BR:
ccav01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.5 UDP-arabinose 4-epimerase
112522656
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-GeneID:
112522656
NCBI-ProteinID:
XP_024987694
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Position
LG 12:complement(5898439..5904304)
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AA seq
416 aa
AA seq
DB search
MLNFNKSRSQARPNRSYALGGMDHTEPNKKKGFVRKIILAIALVGLCIFMLKQSPSFKSP
NVFSRHETGVTHVLVTGGAGYIGSHASLRLLKESYRVTIVDNLSRGNLGAVKVLQELFPE
PGRLQFIYADLGDPKAVNKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL
EAMAAHNVNTLIYSSTCATYGEPEKMPITEETPQHPINPYGKAKKMSEDIIQDFHKNSDM
AVMILRYFNVIGSDPDGRLGEAPRPELREHGRISGACFDAARGITNGLKVRGTDYKTPDG
TCIRDYIDVTDLVDAHVKALENSKPGQVGIYNVGTGKGRSVKEFVEACKKATGVSIKVDY
LPRRPGDYAEVFSDPSKILRELKWSAQYTDLEKSLQVAWKWQKLHHNGYGPSNPSF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctgaactttaacaagtcaagatctcaagcacggcctaacaggtcctatgctttagga
ggcatggatcatacagagccaaacaagaagaaaggtttcgtgagaaagattattttggct
atagcccttgtaggattatgcatttttatgctcaaacaatccccatctttcaagagccct
aacgtcttctctcggcacgaaacaggggttacccacgtgttggtaactggaggtgctggc
tatattggttctcatgcttcactacggcttttaaaagagtcttatcgtgtgactatagtg
gacaatctctctcgtggaaacctaggtgctgtcaaagtacttcaagaattgttcccagaa
cctgggagacttcaattcatttatgcagatttgggcgatccaaaagccgtgaacaaaatc
ttttctgaaaatgcatttgatgcagtgatgcattttgcagcagttgcatatgttggggaa
agtacccttgatccactaaaatattatcacaatatcacatcaaatacgttggtggtattg
gaggcaatggcagcacacaatgttaatactctgatatactcgagcacatgtgctacatat
ggggagccggagaagatgcccattacagaagaaactcctcagcacccaattaatccttac
gggaaagccaaaaagatgtcggaagatattattcaggatttccataaaaattcagacatg
gcggtcatgattttaagatacttcaatgtgattgggtcagatccagatggaaggttagga
gaagcaccgagacctgaattacgtgaacatggaagaatttcaggtgcatgcttcgatgca
gcacgtgggattaccaacgggctcaaggttcgaggaacagattataaaaccccagatggg
acttgcatacgtgactacattgacgtgactgatctagttgatgctcatgtaaaagcactc
gagaactcaaaacctggacaagtcggaatctacaatgttggtacaggaaaaggcagatca
gttaaagagtttgtggaagcttgtaagaaggcaacaggggtatcaattaaagtagactac
ttgccacgtcgacctggtgactatgcggaagtattcagcgacccatcaaagatcctccgt
gaactgaaatggtcggcacaatacacggatttagaaaagagtttgcaggttgcatggaaa
tggcagaaattgcaccataacggatacggtccctcaaacccttctttttaa
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