Cynara cardunculus var. scolymus (artichoke): 112522690
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Entry
112522690 CDS
T05604
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03420
Nucleotide excision repair
ccav04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112522690
09124 Replication and repair
03420 Nucleotide excision repair
112522690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112522690
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112522690
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112522690
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
112522690
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
112522690
TCR (transcription coupled repair) factors
Cul4-CSA complex
112522690
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112522690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
112522690
NCBI-ProteinID:
XP_024987746
LinkDB
All DBs
Position
LG 12:complement(6350003..6361102)
Genome browser
AA seq
795 aa
AA seq
DB search
MKKAKSQAVACSLDSKNGIKQHHFDDATTNSSVDPFSMIEDHAETDVVDSDSARASSSGG
FTANLARKKAIPPQPAKKLVIKLLKAKPTLPTNFEENTWAVLKSAISAIFLKQPDFCDLE
KLYQAVNDLCLHKMGGNLYQRIEKECESHISATLQSLVGQSEDLVVFLSLVETTWQDFCD
QLLMIRGIALYLDRTYVKQTTNVRSLWDMGLQLFRKHLSIASEVEHKTVFGLLKMIESER
LGEAVDRTLLNHLLKMFTALGIYSESFEKPFLDCTSEFYAAEGVKYMQQSDVSDYLKHVE
VRLHEEHDRCVLYLDASTRKPLLATAERQLLERHIAAILEKGFIMLMDGSRIQDLQRMYV
LLCRVNALESLRQALSSYIRRTGQSIVTDEEKDKDMVFSLLEFKASLDAIWEDSFSKNEA
FCNTIKEAFEHLINIRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQG
KDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEIN
ESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPLMDVRLPHELNVYQDIFKEFYLSKYSG
RRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATCIEDKEL
RRTLQSLACGKVRVLQKNPKGREVDDNDSFMFNDVFTAPLYRIKVNAIQLKETVEENTST
TERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPSDLKKRIESLIDREY
LERDRNNPQIYNYLA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggccaagtcccaggccgttgcctgctctctcgactccaaaaatggcatcaaa
caacaccactttgatgatgctactactaattcttctgtcgaccctttttccatgatcgag
gatcacgctgaaaccgatgttgttgattccgatagtgcacgcgcctcctcttctggcggc
ttcaccgccaatttggctcgtaaaaaagcaatacctcctcagcctgctaagaagcttgtt
atcaagctactcaaagccaagccgaccttgcctacaaacttcgaagagaatacatgggca
gttttgaagtcagctattagtgccatattcttgaagcagccagatttttgtgacctagag
aagctttatcaggctgtcaatgatctttgcctacacaagatggggggaaatctttaccaa
cggattgaaaaggagtgtgaatcccatatatctgccactttacaatctttagttggccaa
agtgaagatctagtagttttcttatcgcttgtagagacaacctggcaagatttttgtgac
caactgttgatgatccggggaatagcgttgtatcttgaccgtacatatgtgaaacaaact
acaaatgtgcgatcgttatgggacatgggcttgcaactgtttcgaaagcatttatcaata
gcttcagaagttgagcacaaaacagtatttggccttttgaaaatgatcgagagcgagaga
ttaggtgaagcagttgatcggaccctgcttaaccatcttttgaagatgttcactgcattg
ggaatttactccgagagtttcgagaagcccttccttgactgtacatcggagttctatgca
gctgaaggagtaaaatacatgcagcaatcagatgtttcagattatttgaaacatgtggag
gtaagattgcatgaagagcatgacagatgtgtactctatctggatgctagtacaagaaag
ccgttactagccactgctgaaagacaactccttgagcgccatattgctgcaatacttgag
aagggtttcattatgttgatggatggtagtcgaattcaagatctccaaaggatgtatgtg
ctcctgtgtagagtaaatgccctcgaatccttacgacaggcccttagctcatacatccga
cgaacgggccagagcatagtaactgatgaagaaaaagacaaagacatggtcttctccctt
ttagaatttaaggcatctcttgatgcaatatgggaagatagcttttcaaagaatgaagcc
ttttgcaacacgatcaaagaagcatttgagcatcttatcaatatccgccagaaccggcca
gctgagttgattgcaaaatttttggatgagaaactccgtgctggaaataagggtacatca
gaggaagagttggagggcactcttgataaagtgttagttctgttcagatttatacagggt
aaggatgtgttcgaggcgttctataagaaggatcttgcaaaaaggctactgcttggaaag
agtgcatcgattgatgctgaaaagtccatgatctctaagttaaaaactgaatgtggcagt
cagtttacaaacaagcttgaaggaatgttcaaggacatcgagttatcaaaagaaataaat
gaatctttcaagcaatcatctcaagctaggacaaaacttccatcaggaatcgagatgagt
gttcatgtcttgacaacagggtattggccaacatatccactgatggatgttcgccttccc
catgaactaaatgtgtatcaggacatttttaaagagttttacttgagcaaatacagtggt
aggcggttaatgtggcaaaattcattgggtcactgtgttctgaaagcagaatttcccaaa
ggtaaaaaggagttggcagtttctttatttcagactgttgttttgatgctgttcaatgat
gcacaaaagcttagttttcaagatatcaaggatgccacgtgcatcgaggacaaggaactg
aggagaactctgcaatcccttgcttgcggaaaagttcgtgtcctccaaaagaatccaaaa
ggcagggaggtggatgacaatgattcctttatgttcaatgatgtatttactgctcctctt
tatcgtataaaggttaacgctatccagctgaaggaaactgttgaagaaaacacaagcacg
acagagagagtgtttcaagatcgtcaatatcaggttgatgctgctattgttcggattatg
aagaccagaaaagtgctgagtcacacgcttttgattacggaactctttcagcagctgaag
ttccctataaagccatcggacttgaagaaaaggatcgaaagcctgattgatcgggaatat
ctagagagagacaggaacaatcctcaaatatacaattacctagcgtaa
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integrated database retrieval system
