Cynara cardunculus var. scolymus (artichoke): 112522792
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Entry
112522792 CDS
T05604
Name
(RefSeq) RING-H2 finger protein ATL11-like
KO
K16282
E3 ubiquitin-protein ligase RHA2 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112522792
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112522792
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112522792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-RING_5
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_Vps41
zf_RING_Vps8
Prok-RING_4
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
112522792
NCBI-ProteinID:
XP_024987867
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All DBs
Position
LG 12:4682563..4682997
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AA seq
144 aa
AA seq
DB search
MFCISTISSFIASLTAYLIWAWDILIHLCFFNHHNLQQLHHLPQKSQLGLPQLQWSSKEP
VECAVCLSDIEEDEEIRVLRCDHLFHKRCLDRCIEYRHTTCPLCRDILAGPRMVCELGRE
LLFFSFCSTNSSSHDDDFDRWWIR
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgttctgtatatcaacgatatctagttttattgcgtcattaactgcttatttgatatgg
gcatgggatatcttgattcatctttgtttctttaatcaccataacttacagcagcttcat
catcttcctcaaaagagccaattagggcttcctcagttgcagtggtccagcaaggagcca
gttgagtgtgcagtctgcttgtcagacatagaagaagatgaagagatcagagtcctcaga
tgcgatcatttgtttcacaaacgttgcctcgaccgctgtatcgaatataggcacacgacg
tgccccttgtgccgcgatattcttgccgggcctcgaatggtttgtgaacttggtcgggaa
ctgctgtttttcagtttctgttcaactaatagttctagtcatgacgatgatttcgataga
tggtggattcggtga
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