Cynara cardunculus var. scolymus (artichoke): 112522850
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Entry
112522850 CDS
T05604
Name
(RefSeq) DNA polymerase eta isoform X1
KO
K03509
DNA polymerase eta [EC:
2.7.7.7
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112522850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112522850
Enzymes [BR:
ccav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
112522850
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
112522850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
POLH-Rev1_HhH
IMS_C
IMS_HHH_1
UBM
IMS_HHH
YBL010C_LAA2
EspB_PE
Motif
Other DBs
NCBI-GeneID:
112522850
NCBI-ProteinID:
XP_024987935
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All DBs
Position
LG 1:22043166..22053445
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AA seq
687 aa
AA seq
DB search
MPVARPESSDSRIIAHVDMDCFYVQVEQRKQPHLRGQPTAVVQYNSWKGGGLIAVSYEAR
KDGVKRSMRGDEAKKVCPQIQLVQVPVARGKADLSIYRNAGSEVVSILARKGRCERASID
EVYLDLTDAAETMLKETPLESLESINEEVLKSHVLELSSNGNDDKELVREWLQRRDADHR
DKLLACGAFIVAELRLQVLRETEFTCSAGIAHNKMLAKLASGMNKPAQQTIVPFASVKGL
LEPLPIKKMKQLGGKLGSSLQIDLGVNTVGDLLQFSQEKLQDFYGVNTGTWLWNVARGIS
GEEVEGRLLPKSHGSGKTFPGPRALKTLAAVEKWLKELCEELSERLQSDLEKNKRVAHTL
TLHANAYKSTDTDSYKKFPSKSCPLRYGGGKIQEDAVNLFQAGLREYLGAYIGSQCGGWG
ITGLSVSASKIVPIPSGTCSITRYFQCRDQFHSSSELSDEKFIPEDDLLSPSRSESHPAP
HQTEQQTECGGEEAPVTYDITSFDQYENACKDEQASSDITREVSHLLSGAESCSTPKQNE
RQLRLPGKESKMKYPSDGIRSYGQKRKATKEKGTSSILRFLQSNSCSTSKQDNVSALQET
KPLSSVVQEPLVMESESFPGSQNGRSTNTWSYKADEIDQSVVDELPPELQEEVRTWLRPQ
KRANMVKQGSSIAHYFPPSKNEQRNPK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggcgcgaccagagtcatctgattctaggatcattgctcacgtcgacatggat
tgcttttacgttcaagtggagcaacgcaaacaacctcatttaagaggtcaaccaactgct
gtagtacaatacaactcttggaaaggtgggggcctgattgctgtcagttatgaggccagg
aaggatggggtgaaacgctcaatgcgaggtgatgaggcaaagaaagtttgtccgcaaatt
cagctagtccaagttcctgtggcccgtggtaaagctgacttaagcatatatcggaatgca
ggttcagaggttgtttccattcttgcgagaaagggtcgatgcgagcgtgcatcaattgat
gaagtgtaccttgacctcactgatgctgctgaaacaatgttgaaagaaacaccactagaa
agcttggaaagtatcaatgaagaagttctcaaatcacatgttttggagcttagttcaaat
ggaaatgatgacaaagaacttgtgagggaatggctgcagaggagagatgctgatcaccgt
gacaagttgttagcgtgtggagcctttattgttgctgaactcaggttgcaagttttacgg
gagactgagtttacatgttcggcaggcattgcccataacaaaatgctggctaaactagca
agtggcatgaataagcctgcacaacaaactattgtcccctttgcatcagtgaaggggctt
cttgaacctttgcctataaagaaaatgaaacagcttggtgggaagcttgggagttccttg
caaattgacctcggtgtgaatactgttggggatctattgcagttctctcaggaaaaacta
caagatttctatggtgtcaataccggtacatggctatggaatgttgcgagagggatcagt
ggggaggaagttgagggtcgcctgctccctaagagccatggctctgggaagacatttcct
ggacctagggccttaaaaactcttgctgctgttgaaaaatggctcaaagaactttgtgaa
gaattaagtgaacgactgcagtcagacctggagaagaataaacgagtcgcacatacactt
actctgcatgctaatgcgtacaagtccacagatacagattcatacaaaaagttcccttct
aagtcatgtcctttgagatatgggggaggaaagattcaagaagatgctgtaaatcttttc
caagctggattacgtgaataccttggggcatacataggaagccagtgcggtggatgggga
attactggtctttctgtttcagccagtaaaattgttcctataccatctggaacctgttcg
attacaaggtacttccagtgtcgagatcagtttcactcttcatcagaactgtcagatgaa
aaattcatacccgaagatgatcttttgtcaccatcaagaagtgagagccatccagcccct
catcaaacggagcaacaaactgaatgtggtggggaagaggctccagtcacatatgatatt
accagttttgatcaatatgagaatgcatgtaaagatgagcaggctagcagtgatatcacc
agagaagtttcccacttattatcaggagctgaaagctgttcaactcccaagcagaacgaa
cgacaactgaggttacctgggaaagaatcgaagatgaagtaccctagtgatggaataaga
tcatatggacagaaaagaaaggcaacaaaagaaaagggaacatcttccatcctaagattt
ctccaaagcaactcttgctcgacgtcaaagcaagataacgtcagtgctctccaagaaaca
aagcctttgtcgtctgtagtacaagaaccactagttatggagagtgagagctttcccgga
agtcaaaacggacggagcacaaatacatggagttacaaggcggatgaaatcgaccaatct
gtggttgatgagttaccaccggaactacaggaagaagttcgtacttggctgcggcctcaa
aagcgtgctaacatggtgaaacaaggttctagcatcgctcattacttccctcctagcaaa
aacgaacagagaaatcccaagtaa
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