KEGG T05604: 112522878

Cynara cardunculus var. scolymus (artichoke): 112522878

Entry

112522878         CDS       T05604

Name

(RefSeq) E3 ubiquitin-protein ligase ATL4-like

K10663

E3 ubiquitin-protein ligase ATL4 [EC:2.3.2.27]

Organism

ccav Cynara cardunculus var. scolymus (artichoke)

Brite

KEGG Orthology (KO) [BR:ccav00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccav04121]
    112522878
Enzymes [BR:ccav01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112522878
Ubiquitin system [BR:ccav04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    112522878

SSDB

Motif

Pfam:

zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-ANAPC11 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_16 PAP2 Chitin_bind_4

Other DBs

NCBI-GeneID:

112522878

NCBI-ProteinID:

XP_024987966

LinkDB

Position

LG 12:9222758..9223846

AA seq 362 aa
MDIGTPPPPPPPPYIGATPTTTTTTNRPPVYNNGGIAADIPQIPHHHHHPSSHSSSSSAS
SLIIVMIVISSAIIVSATVYLLIRFLSRRCNRSLRTTFSPTDDVVSDNRDENENVHHHVI
SFGNNGVESLPLFRFSSLTGKIAGGDCAVCLSKFEGVDQLRLLPLCCHAFHAECIDAWLK
SNQTCPLCRSTVNPTEDDVLNKIVSASAGGGRVGRNRSNSFRIEIGNVSQRREPSDSDRR
SYSIGSYEYVLDDGYEISVESTHRRGGSDCTSVDKDSTAPEPPGHNLAAEVGAGGGSGRR
NWLRDYVDRVSVSLSSRTQSLRGSGRFLTGNLRRSETVDEFEASHGRVGEEISELFRWLS
GI

NT seq 1089 nt +upstreamnt +downstreamnt
atggatattggaacacctccgccgccaccaccaccaccctacatcggagcaactcccacc
accaccaccaccaccaacaggcctccagtttacaacaacggcggtattgcagcagacatt
cctcaaataccacaccaccaccaccatccatcctctcattcttcttcgtcgtcggcatct
tcgttaatcatagtgatgatagttatctcctccgctattatcgtctccgccaccgtctac
ctccttatccgctttctctctcgccgctgcaaccgttccctccgtactacgttttccccc
actgacgacgtcgtttccgacaacagggatgaaaacgagaacgtgcatcatcacgtgatc
tcttttggtaacaatggagtggagtcgcttccgctctttagattttcttcactcaccggg
aaaatcgccggcggagactgtgcggtgtgtttatccaaatttgaaggtgtagatcagctc
cggcttcttccattatgctgtcatgccttccacgcagagtgtattgatgcttggctcaaa
tctaatcagacgtgtccgctctgccggtcgacggtgaatcctaccgaagacgatgtactg
aacaaaatagtctcggcctccgcaggcggcggtagagtcggtagaaacagaagcaacagt
tttcggatcgagattgggaatgttagccagcgacgagaaccttccgattcagaccgaagg
tcgtattccattggttcgtacgagtacgtactcgacgacggctacgagatctctgtggaa
tcaacgcacagaagaggcggttccgactgtacttcagtggacaaggactctacagctcct
gaaccgccgggacataatttagcggcggaggtcggagctggcggcggcagtggacggcgt
aattggttgcgagattacgtggatcgcgtctccgtttctctctcctcacgtactcaatcg
cttcgtggttctggaaggttcttgaccggaaaccttcgccggagtgagaccgtggatgag
tttgaagcaagtcatggtagagtcggagaagagatcagcgagcttttccggtggctctcg
gggatataa

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