Cynara cardunculus var. scolymus (artichoke): 112522883
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Entry
112522883 CDS
T05604
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25 isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112522883
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
112522883
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
PepSY_TM
EIF4E-T
Motif
Other DBs
NCBI-GeneID:
112522883
NCBI-ProteinID:
XP_024987973
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Position
LG 12:complement(3774391..3788440)
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AA seq
797 aa
AA seq
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MAEKKQLILVVEGTAALGPYWRTIISDYLEKVIRSFCDTESLKPSGSIVELALIIFNGHG
SYSSCLVQRSGWTRNVDYFFEWLSAIHFTGGGFCDAAIAEGLGEALMMFPSPNGSQNQHN
LGIQRHCILVAASNPYPLPTPVYRPPMQKMEPSDNSEAQSESRLSDAETVAKTFAQQCSV
SLSVICPKQLPKLKAVYNAGKRNPSAADPTIDIVKNPHYLVLISETFMEARAALNRSGIT
NLPSQSPIKVDTTSVPPVSGPPQTSIPAVNGSSMNRQPVPVGSIPPATVKVEPTTVSSMA
PAPAPTPAFQHVPPVPRATSQGVPSLQTSSPLSVSQEMMSTNDGVQDLKPNVGGIQQPVR
PAGHINILNTLSQARLTAALAGGTSMGLPSIAGNPMAMHMSNMISSGMPSTVPVAQSVIS
SGQSGITSIAGSGTLSGTAQVAQSTVPGSFSSATSNMAGSSSLGVSQPLGNLQGSVGMGQ
SVPGMSQGNLPGPQMVQSGMGMNQNMMSGVGQSGMPGAGTGSGAGTGTGSGNGTMMPTPG
MSQQVQGMQSLGVNNNTAANVGLPQQTTGALQSAQSKYVKVWEGNLSGQRQGQPVFITRL
EGYRSASASESLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEK
KLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISGQQQPQQLQPQQHPQLQQQ
QQQQQQLQHLQQQQQQQMQQPPQGGSAPPPALQQQQQQQMVGNGMNQGYVQGPGGRTQLG
QVSSQGAQSMSSGSFIN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaaaagcagctcatcttggtggttgaaggtaccgccgctctgggcccttac
tggcgcaccataatctccgattatcttgaaaaagttatcaggtccttctgtgataccgag
tctttgaaaccatctgggtctattgttgagctggctcttataatattcaatggacatgga
tcttacagctcttgcttggtacaacggagtggctggacaagaaatgttgattatttcttt
gagtggctatcagcaatacacttcactggtggtggtttttgtgatgctgcaattgcagag
ggacttggtgaagctttaatgatgtttccttccccaaatgggagccaaaatcaacataat
ctgggtattcaaaggcattgcatccttgttgctgcaagtaacccatatcctttgccgaca
ccagtttatcgaccaccaatgcagaaaatggagccaagtgataatagcgaggcacagtca
gaaagccgtttatcagatgctgagacagtggctaaaacatttgctcagcagtgttccgtt
tctctgtcagttatatgcccgaagcagcttccaaaactcaaagcagtctataatgcggga
aaaaggaacccttcagccgctgatccaaccattgatattgtgaaaaatccacattatctt
gtgctcatctcagaaactttcatggaggctcgtgctgccttaaatcgatcaggaataaca
aatttgccttctcagagtcctataaaagtagatacaacttcagttcctccagtatcagga
cctcctcagacttcaattccagcagtaaatggatcttcaatgaaccggcaaccagttcct
gtaggaagcattcctcctgcaactgtcaaagttgagcccaccacggtttcttcaatggca
ccagcacctgcacctacaccagcatttcaacatgttccacctgttcctcgtgctacctct
caaggagtcccaagcttgcaaacatcgtcaccattatctgtctctcaagagatgatgtca
actaatgatggtgtgcaagatttgaaacctaatgtcggtggtatacaacagccagtgcgt
cctgctggccacattaacattcttaacactctgtcacaagcacgattaacggccgccctt
gctggaggaacatctatggggctaccatcaattgctggaaatcctatggccatgcatatg
tccaatatgatatctagtggaatgccatcaactgtacctgttgctcaaagtgtaatatca
tctgggcaatcaggtattacatcaattgctgggtctggaacactttcggggactgcacag
gttgcacagagtactgtaccaggttcttttagttcagccacttctaacatggctgggagt
tcaagccttggcgtatcacaaccgttgggtaatcttcaaggaagtgttggtatgggtcag
tccgttcctggaatgagccaagggaaccttccaggaccgcaaatggtacagagtggaatg
ggtatgaatcagaatatgatgagtggtgtgggtcaatcaggtatgcctggagctggaact
gggagtggagctggaactggaactggaagtggaaatgggacaatgatgcctactcctggt
atgtctcagcaagtacaaggaatgcaatctcttggtgtaaataacaatacggcagctaat
gttggtctcccacaacagacaacaggtgcactgcaatcagcacagtcaaaatatgtgaaa
gtctgggaggggaacttatccgggcagcgacaaggccagcctgtgtttattaccagatta
gaagggtacaggagtgcatcagcttctgaatcgcttgcagctaattggccaccaacaatg
caaatagttcggcttatatctcaagatcacatgaataacaagcaatatgtcggaaaggca
gatttcttagttttccgagcaatgaatcagcatggatttcttggacagctgcaagaaaag
aagctttgtgcagtgatacagttgccatcacagacacttctactgtctgtatctgataaa
gcatgccgattgattggaatgcttttccctggggacatggtggtgtttaagccccaaata
tccggtcagcaacagccacaacaacttcaaccccaacagcacccacaactgcaacaacaa
cagcagcagcagcagcaactgcagcacttgcaacaacagcagcagcagcaaatgcaacaa
ccgccacaaggagggtcagcaccaccaccagcgttgcagcagcagcaacagcagcaaatg
gttggaaacggaatgaatcaaggttatgttcaaggtccaggagggcgaacacaattgggt
caagtttcttcacaaggggcacaaagcatgtccagtgggagctttattaactga
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