Cynara cardunculus var. scolymus (artichoke): 112522928
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Entry
112522928 CDS
T05604
Name
(RefSeq) transcription factor IIIA-like
KO
K09191
general transcription factor IIIA
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112522928
03021 Transcription machinery [BR:
ccav03021
]
112522928
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112522928
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
112522928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
Zap1_zf1
zf-C2H2_aberr
zf-met
zf-H2C2_2
Zf-C2H2_ZNF451_1st
DUF7565
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
112522928
NCBI-ProteinID:
XP_024988042
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All DBs
Position
LG 12:2082366..2085184
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AA seq
363 aa
AA seq
DB search
MGEETTDTKREFPIFRDIRRYTCEYCGIVRSKKTIINAHIQSHHQDEIEEKEGDREEDTE
GGKLNVCEECGVSFRKPAHLRQHMQSHLLERPFTCPIDDCNSSYRRKDHLTRHLLQHDGK
LFNCPIENCKSKFSIQGNMTRHVREIHDDLGSTADDMNEQKQYACLEPGCGKVFKYASKL
QKHEESHVRLETVEAFCAEPGCMKYFANEQCLKTHLQFCHQHISCEICGSKQLKKNIKRH
LRTHDKVVSKERIKCSFNGCNLTFSTISNLRQHVKAAHFQQKEFVCSISGCGMRFSFKHV
RDKHEKSGRHVYTLGDFVEADEQFRSRPRGGRKRKLPTAIESLMRKRVVAPAESIQDISW
SVD
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaaacaaccgatacgaagagagaatttcctattttcagagacataaggcgt
tatacttgcgagtactgtggtatcgttcgttcaaagaagactataatcaacgctcacatt
caatctcatcatcaggatgaaatagaggagaaagaaggcgatagggaagaggatacagaa
gggggaaagttgaatgtttgcgaggaatgcggtgtttcttttcgaaaacctgcacacttg
aggcagcatatgcaaagccatttgctcgagaggccttttacttgtccaatagacgactgc
aattccagttaccgtaggaaagatcacttaactcgccatcttcttcaacacgatggtaaa
ctttttaattgtcctattgaaaactgcaaaagcaagttttcaattcaaggtaacatgact
agacacgtgagagaaatccatgacgacttggggtctactgctgatgacatgaacgaacag
aagcagtatgcttgtttggaaccgggatgtgggaaagtttttaagtatgcatcaaagtta
caaaaacacgaagaatctcatgttaggttagaaacagtggaagcattctgtgctgaaccg
ggctgtatgaaatatttcgccaacgagcaatgtctaaagactcacctccagttttgccat
cagcacatcagctgtgagatatgtgggagcaaacaactgaagaagaatattaagcgtcac
cttcgcactcacgacaaagtggtttcaaaagagaggattaaatgcagtttcaatggttgc
aacctaacattctcaacgatttcaaatctccgacagcatgtgaaagctgcccattttcaa
cagaaggaatttgtgtgcagcatttccgggtgtggaatgaggttttcgttcaagcatgtg
agagataagcacgagaaatccggccgccatgtttacacactgggagattttgtggaagct
gatgagcaatttcgatcaaggccaaggggtggtaggaaaaggaaattaccaactgcaatt
gaaagccttatgaggaagagagttgttgcgcctgctgaatctatacaagacatctcttgg
tcggtagattaa
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