Cynara cardunculus var. scolymus (artichoke): 112522955
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Entry
112522955 CDS
T05604
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112522955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112522955
Enzymes [BR:
ccav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112522955
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
112522955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
112522955
NCBI-ProteinID:
XP_024988090
LinkDB
All DBs
Position
LG 12:complement(17402..44272)
Genome browser
AA seq
1145 aa
AA seq
DB search
MGVIEDSAMLDASLQGSEGLDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLESFNYFV
KTEIKKIVRANDLVTSRYDPSVYLRYKDVWIGKPSVVVDGVTDSLTPQKCRLSDMTYAAP
IFVNIEYCNGSHGHNTHPQFKKDVVIGRMPIMLRSSSCVLYGKDEDELAKLGECPLDPGG
YFVVKGNEKVILIQEQLSKNRIIIDTDKKGCIQASVMSSTEMTKSKTIIRMEKEKVYLVL
NAFTSKVPIMLVMKAMGMETDQEVVQMLGRDPQYATLLLPSIEDCASIGIYTQLQALEFL
EKKRKKSMSRFGKDEGALGVLRDIFIPNIRVRENNFHLKCVYVVVMLRRMMDAILNKDAM
DDKDYIGNKRLELSGQLLSLLFEDLFKSMNDQVKFNVDKILSKPSRSSRFDVSQHLLKES
ITVGLERSLSTGNWDVSRFKMHRKGMTQIVTRLSFIGAFGSMTKISPQFEKSRKVSGPRA
LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPIISLCTCFGVEDLSTLSGEE
LHSPSSYLIILNGLILGKHRRPERFANVMRKLRRAGKVGDFVSIYVNEKQRCVYIASDGG
RVCRPLVIADNGVSRIKDHHMRELKDGVRNFDSFLREGLIEYLDVNEENNALIALYEGEA
THETTHVEIEPFTILGACAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIY
LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI
VMKKISAAYQKYDNTSDQFSSPCRSQHDQIQILDNDGLASPGEIIRHQDVYFQKECPIDP
KGSMKSHPSQTPYRTSKQTYKGAEGETAVVDRVALCSDKRNNLNVKFMIRHTRRPEVGDK
FSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCG
RFHYGSAFGEPSGHADKVEDISETLVKHGFCYNGKDFLYSGITGMPLQAYIFMGPIYYQK
LKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERDCLIAYGTSNLIYERLMIS
SDPFEVQVCRKCGLLGYINYKSKTRVCSTCKNGDNISAMKLPYACKLLFQELQSMNIVPR
LKLAD
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcattgaagactctgctatgttggacgcaagtcttcaaggtagtgaagggctt
gacaagcaattccttgctgctccagtgaagtctgctgtcgataagttccagttacttccc
gagtttctcaaggtcaggggtttggtgaagcaacatctggaatctttcaattattttgtt
aaaactgaaataaagaagattgtgcgagctaatgaccttgtgacatctagatatgatcct
agcgtctacctgagatataaagatgtttggattggaaagccttctgtagttgttgatggt
gtgactgactcactaacccctcaaaagtgtcggctaagcgacatgacgtatgcggctcca
atatttgtgaacattgagtattgcaatggtagtcatggtcataatacccatccacaattc
aagaaagatgttgttataggaagaatgcctatcatgttaaggagctcttcttgcgtcctt
tatggcaaggacgaagatgaactagcaaaactcggtgaatgcccacttgacccaggcgga
tattttgttgtgaaaggaaatgaaaaggtgatattaattcaagaacaactttcaaagaac
aggataattatagacacagataagaagggttgcatccaggcatctgtcatgagcagcaca
gagatgacaaaaagtaaaacaattatcagaatggagaaagagaaagtgtatttggtgttg
aatgcatttacttccaaggttcccattatgttggtcatgaaagctatgggtatggaaact
gatcaggaagttgtgcagatgcttggtagagatcctcaatatgctactttgcttttgcca
tctattgaggattgtgcaagtattggtatctatacacagctgcaagctttggagttcctt
gaaaagaagcgtaaaaaatcaatgtcgaggtttggtaaggatgaaggagctttgggtgtt
cttcgagatatttttattccgaatattcgggtgcgggaaaacaattttcatttgaagtgc
gtatacgttgtggtgatgttgagacgcatgatggatgcaattttaaacaaggatgcaatg
gatgacaaagattatataggcaataaacggctggaactttcggggcaattattatctcta
ctatttgaggacctgttcaagtcaatgaatgaccaagtaaaatttaatgtagataagatc
ctatccaagcccagtcgttctagcaggtttgatgtatctcagcatctactgaaagagagt
attactgttggcttggagcggagcctttctactggaaattgggatgttagtcggtttaag
atgcacaggaaaggcatgacgcagattgttacaagactgtccttcattggagcatttggc
tccatgacaaaaatttcaccacagtttgagaagtcgaggaaagtcagtggacctagggcc
ttacaacctagccagtggggcatgctttgcccctgtgacactcctgaaggtgaagcttgt
gggttggtgaaaaatctggctctaatgacacatgttacaacagatgaagaggaaggccca
attatctccttgtgtacctgcttcggtgttgaagacttgtcaacactttctggagaagaa
ctccattcaccaagttcatatctcatcatattaaacgggcttatcctcggcaagcatagg
aggccagagcggtttgctaatgtaatgagaaagctacggagggcgggcaaagtaggtgat
tttgtaagcatctatgtcaatgagaaacagcgttgtgtttatattgcttcagatggtggt
cgtgtttgtcggccacttgtaattgcagacaatggtgtatctagaattaaggatcatcac
atgagagagttgaaggatggagttcggaatttcgacagttttctacgggaaggcctgata
gagtatcttgatgtcaacgaagagaacaatgctttgattgctttatacgaaggagaggca
acccatgagacgacccatgttgaaatagaacctttcacaatcttaggtgcttgtgctgga
ctgattccttttcctcatcataaccaatccccgagaaatacctatcagtgtgccatggga
aagcaagcaatgggtaatattgcatataatcagctatgtcggatggataccttgatctac
cttttggtttatcctcaacggccgctactgacgacgagaacaatcgagctggttgggtat
gataaacttggagctgggcaaaatgctactgttgcagttatgagttacagtggttatgac
attgaggatgccatagttatgaataaatcatccttggatcgcggttttggtcgctgtatc
gtaatgaaaaagatatcagctgcttatcagaaatatgacaatactagtgatcagttctca
tctccttgcagatcccagcacgatcagattcagattctggacaatgacggacttgcttct
cctggtgaaataatcagacatcaagacgtttatttccagaaagagtgtcctatagatcca
aagggttccatgaagtcacatccatcgcaaactccatatagaacaagtaaacaaacctac
aaaggtgcagaaggggagacggctgttgtggatagagtggctttgtgctctgataagcgt
aacaatttaaatgtaaagttcatgattcgtcatactcgaaggcctgaggttggtgataaa
tttagtagtcgacatggccagaaaggtgtttgtgggaccattgtccaacaagaagatttt
cctttctctgaacgtggcatttgcccagatttgattatgaatcctcatgggtttccaagt
cgaatgactgttgggaagatgatagagcttcttggtagtaaggctggtgtttcatgcggg
agatttcattatggcagtgcatttggggaacctagtggtcatgcagacaaagttgaagat
ataagtgaaacccttgtgaagcatggcttttgctacaatgggaaggacttcctatattca
ggtatcactggtatgccactacaagcatatattttcatggggccaatatactaccagaag
ctaaagcacatggtccttgataagatgcatgctcgaggcatgggccctcgccaactgata
acaagacagcccacagaagggagaagccgtaatggagggttgcgagtgggggaaatggaa
cgagattgtttgattgcttatggaacgagtaacctgatatatgagcgcttaatgatctct
agtgacccttttgaggttcaggtttgtaggaaatgtggcttattaggatacataaattac
aagtcgaaaactagggtatgttccacatgcaagaatggagataatatctcagccatgaaa
ctaccatatgcttgcaagcttttatttcaggaactccagtcaatgaatatagttcctcgt
ttgaagttggctgattaa
DBGET
integrated database retrieval system
