Cynara cardunculus var. scolymus (artichoke): 112522988
Help
Entry
112522988 CDS
T05604
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112522988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112522988
Enzymes [BR:
ccav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
112522988
Transfer RNA biogenesis [BR:
ccav03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112522988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
rve
Motif
Other DBs
NCBI-GeneID:
112522988
NCBI-ProteinID:
XP_024988140
LinkDB
All DBs
Position
LG 12:9707917..9735418
Genome browser
AA seq
1087 aa
AA seq
DB search
MGILTLPLVTSLLKPHKPHFSLLFTTTVHHHHHRPTLFHHLPIRSRFSRATIPRCSFTTS
AITQRDQSSVTIDDSSSNAEERPIKVSIPTFQQAIQRLQEYWASVGCTIMQCSNTEVGAG
TMNPLTFLRVLGPEPWNVAYAEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLF
IRSLSALGIDVNEHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLMP
VSVEITYGLERILMLLQGVDHFKKIQYANGITYGELFSENEKEMSAYYLEHASVDHIQKH
FDFFEAEARALLDLGLAIPAYDQLLKTSHAFNILDSRGFVGVTERARYFGRMRSLARQCA
LLWSNTRESLGYPLGIVSQANDLVIPKEVLDSEATKVQVSIEPRLFLLEIGTEELPPNDV
ASAGQQLKDLIVQLLGKQRLTHGEALVLGTPRRLVISVENLCSKQVANEVEVRGPPVSKA
FDNQGKPTKAAEGFCRKNSVPVDSLYTRTEGKTEYVYVRVMESAQLALEVLSKELPGAIA
KVSFPKSMRWNSEVIFSRPIRWILALHGDAVVPFAYAGILSGNISHGLRNTNSATVMVDS
AESYATVMQQAGISVDTEQRKKTILEQSNNLAKGVGGCLVMQSSLLEEVVNLVEAPVPVL
GKFSESFLVLPKDLLVMVMQKHQKYFALTDDKGTLLPYFIAVANGAINESVVKKGNEAVL
RARYEDAKFFYELDTSKRFSEFRGQLNGILFHEKLGTMEDKMIRVESTINELGLALGLSE
DKIQITREAASLAMSDLSTAVVTEFTSLSGIMARHYALREGYSEQVSEALFEITLPRFSG
DILPETDAGTVLSIADRLDSLVGLFGAGCQPSSTNDPFGLRRISYGLVQVLVEKDRNLDL
RHALEVAASVQSLKIDTVTIDEVHQFVTRRLEQFLVDKGINPEVVRAILVERANWPGLAA
KSAYKMETLSRGELLPKVVEAYSRPTRIVRGKDVDVDTQVDEALFETNEEKALWSAFSSI
RSKIYPGIEVDDFVETSLLLIQPLEDFFTHVFVMVEDERIRKNRLALLRNISELPRGIAD
LSVLPGF
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggggatactaacactgccattggtaacctctcttctcaaaccccataaaccccatttt
tctcttctattcaccaccactgtccaccatcatcaccatcgccctactctcttccaccac
ctccctatacgaagccgtttcagtagagccaccatccctcgctgttctttcacaacttct
gcaattactcaacgtgatcaatcttcggtaacgatagatgattcgagttcaaatgcggag
gaacggccgattaaagtctctataccaacttttcaacaagcgattcaacgtctccaggag
tactgggcatctgttggatgtactataatgcagtgcagcaacaccgaggttggagctggg
actatgaatcccttgacatttttaagggttcttggtccagagccatggaatgttgcgtat
gcagagccaagtatccggccagatgatagtcgttatggtgaaaaccctaataggcttcaa
cgtcatactcaattccaggttatactaaagcctgatcctggaaattcgcaagacctcttc
atcaggagtctatcagccctaggcatagatgtcaatgaacatgatattcgttttgtggaa
gacaactgggaaagcccggtacttggtgcttgggggttgggctgggagatttggatggac
gggatggagattacacagtttacctacttccaacaggctggaagtcttcagttgatgccg
gtatctgttgagatcacctatggtcttgaacgcatcctaatgctacttcagggagttgat
catttcaagaaaattcaatatgccaacggaatcacttatggagagctcttctctgagaac
gagaaagaaatgagtgcatattatctagagcatgctagtgtggatcatattcagaaacac
ttcgacttttttgaggcagaagcacgtgctttgcttgatttaggccttgcaatacctgcg
tatgatcagcttctcaagacttctcatgcttttaatatcttagactctagaggctttgtt
ggggtaacagaacgtgctcgttattttggccggatgcgcagtttagctcgacaatgtgcc
ctgctctggtcgaatacaagagagtcacttggatatccattaggcattgtttctcaagct
aatgaccttgtcattcccaaggaggttctagactcagaagccacaaaggtacaggtgtct
attgaaccaagattgtttcttcttgagatcgggacagaagagttaccaccaaatgatgtt
gctagtgcaggccagcaactcaaagatctaattgtgcaattacttggaaagcaaaggttg
actcatggtgaagctcttgtacttggcaccccaaggagactagtaataagtgttgagaac
ctatgctctaagcaagtggcgaatgaagttgaggttcgaggacctccagtttcaaaagcg
tttgataatcaaggaaagccaactaaggcagccgaaggcttttgccgtaaaaattccgta
ccagtggactcattgtatacaagaactgaaggtaagacagagtatgtctatgttcgtgtg
atggaatctgcacagcttgctctggaggttttatcaaaggagcttcctggtgcaattgct
aaagtatcatttccgaagtccatgcgttggaactccgaggtcatctttagccgacctatt
cgttggattttggcgctccatggagatgcagttgtcccttttgcatatgctggtattctg
agtggtaacatctctcatggtctccggaatacaaactcggctacggtcatggtcgatagt
gcagagtcttatgccactgtaatgcaacaagctggaatttctgttgacactgagcaacga
aagaaaacaattctagaacaatccaacaatttagcaaaaggtgttggtggatgtcttgtg
atgcagagcagcttacttgaggaggttgtaaaccttgttgaggcacctgttccagtgctt
ggcaaattttcagagtccttcctagtgctcccgaaagatctattagtaatggtaatgcag
aagcatcagaagtactttgccttgacagacgataagggaactctgttgccatatttcatt
gctgttgcaaatggggcaatcaacgagtcggttgttaagaaaggaaatgaagctgtactc
agagctcgatatgaagatgctaagttcttttatgaactagacactagtaaaaggttttcg
gagttccggggtcaactgaatggaattctatttcatgagaaacttggaacaatggaggat
aagatgatacgtgtcgagagtactattaatgagctcggcttggctctagggctaagtgaa
gataagatccagattactcgggaagctgcatcactggcaatgtcagatctctcaactgct
gtcgttacagagttcacttctctatcgggaataatggcacgtcactatgctcttcgtgaa
ggatattcagaacaggtttcggaggcgttgtttgagatcacacttcctcgattttctggc
gatatactcccagaaactgatgcaggaactgtattatcgattgccgacaggttagatagc
ttagttggtttgttcggagctggttgtcaaccaagctcgactaatgacccatttggtcta
cgaagaatctcttatggtcttgtccaagtcttggtggaaaaagatagaaacttggattta
cgacatgccttggaagtcgcagcttctgttcaatccttaaaaatagacacggtaacaata
gatgaggttcatcaatttgtgacacgaagactcgagcaatttctggtcgataagggaata
aatccggaagtggttcgtgcgattttagtagagcgtgcaaattggcctggtttggctgca
aaatcggcttataaaatggaaacgctgtcacggggtgagcttttgccaaaagttgttgaa
gcatattctcgaccaacaagaattgttcgtggaaaggatgtcgatgttgacacacaggtg
gatgaagcgttgtttgagacaaacgaagagaaagctttgtggagcgctttctcatctatt
agaagcaaaatatatccaggtattgaggtggatgattttgtcgaaacctctttgctacta
attcagccactagaagatttcttcactcatgtctttgtcatggtggaagatgaaaggatc
agaaagaacagacttgcactacttaggaacatctcagagctcccaagaggaatagctgat
ctctcagttttgcctggattttga
DBGET
integrated database retrieval system
