Cynara cardunculus var. scolymus (artichoke): 112522997
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Entry
112522997 CDS
T05604
Name
(RefSeq) methyl-CpG-binding domain-containing protein 9-like isoform X1
KO
K22768
methyl-CpG-binding domain-containing protein 9 [EC:
2.3.1.48
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112522997
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
112522997
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
112522997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
FYRC
FYRN
Phage_zn_bind_3
MBD
PHDvar_NSD
C1_2
KIAA2026_hel
PHD_2
Motif
Other DBs
NCBI-GeneID:
112522997
NCBI-ProteinID:
XP_024988158
LinkDB
All DBs
Position
LG 12:complement(1054614..1064950)
Genome browser
AA seq
1544 aa
AA seq
DB search
MRIARLNLDIATQNANLVYLQALKNYISERRGVLGDGWVVKFEFSESICKRAPIYYAPDG
SRFNSMPEVAHHFGLLLPPNSFETNDKGGSFALLQNGSHATKSLDSASRSLNANIIRERK
SMSQSGVSNGGTAIEVDPMGNSNRGSELFLDGFPVQFQDFFVTSLGKIDPRVSFHTASQI
WPIGYKSIWHDNATGSIFVCNVLDAGDCGPIFRVNRHPCTKHSIPNASTVLCRPKSRPSD
GKDTAGSHDSAVNRAFQAFLDERINTRDKLAEQQKPPSLDDGSYSCLDKVASCLTTESAF
PLQCIPSNNVIRGDIIGEFMVEGRSPSSAWQMVLETLLSACHQAFKDLSVLTFCCNHTVD
RQHIDDSYNINSLDKFGYLRGPKIVNLIRTVEQLDGCCMVLRRWLQPDRFGLDAEFVQEL
VEQLPGVSACLGYKSLVARCQNSPHTVGSGFFTVLRKYSSQPTVSDSLVENRKRLSPPGN
IIASNLPPRLIGDILQAHEFYLRFHKVLGLEALPSREKLEYELLNPWDDDLKPPNSHEGD
KIEDLTSYSTIAPDMKSRFGDFVDATEESEGDGSRSEVAIKCTGVSLANFHMALVKVLVE
DMLAKLTICEQSGAAESKSRKGRKKNMEIMVSSKKIKLSMFPVNEITWPEIARRCILAVL
SMDGSLEASDVTNREFSEVFHCLKGDGGPLCGSLTGMAAMEADAMVLAEASEKIFSSVNS
KFVNFIIDKNDLNIRDSATETNRTDNGCPKWIEVLEPVRKLPTNVGAKLRKCVYESLKQQ
PPPWAVEMLVNSISKDVYKGNASGPTKKIVVSVLEHVRELNPLTKKKAKESRVVRTLYDV
IMRRCRMVLRSVAAEDENRAFFILMAESLFKRNESCDGGHPAPVSRPLDFRTIDLRLDAG
CYGGSHESFIEDVREVWRNLRIIYRNKPKYIDFIETLSKKLEELYEQEVLTLVRKTVDYG
NDSISDETKRELNTMLADTITSTLSVAPWEDGICKVCGKDENDHILLLCDRCDAEYHTYC
LDPPLQRVPKASWYCPSCISFITNQAMSSQEEESDTPVLFRDPDKKKTCKEIVRNGLESL
AELADAMESMEYWELGLEERVFLLKFLCDEALSSTIIRDHINAVDCNIRRDFLGRDSEGR
LYYILGKPERVVVSGPHSIGEVCIASESSSSRELDASERCSWICYESDAEIEALVEWLRD
DDAREKELKETIIQWQRNKSNNQNGEAGKVNRLMSSIHDTNARAALEKKFGSFSEGRVFD
DGKIYRCDCLELVGSTRAHCFSCHSTFFSNEIHNDGKCGIHKEGDALVKQPTLTNDQNEP
DVTFVFEEIRANFCAESLRKEVIKDVGIVGSNRNPVLVKHRVEAENIESSTPLVGRVSKI
LRYLKATLLDIEAALPNEAFRPSRRDSHRLRAWHVFVKSAQSIHEMVQATIILEDMIRTE
HLRNEWWYWSSPSAAIKISTVSSLALRIYALDAAIFYENPPTPPADLTEPVTPSDSNSKK
EASRKSNPKSSSSTMVAMSNNSEPSKTSKSGKRPKKKKLRFSAD
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgcacgcttgaatcttgatattgcaacacaaaatgccaatttagtgtatttg
caagcacttaaaaattacatatctgaaaggagaggtgtactaggagatggttgggttgtt
aaatttgaattttctgagagtatctgcaagagagctccaatttactatgccccagatgga
agtagattcaattcgatgccagaagttgctcatcatttcggtttgctattgccgccaaat
tcctttgaaacaaatgacaaaggtggtagctttgcattactgcagaacggatcacatgct
actaaaagtttggatagtgcttcaaggtcgctaaatgccaatatcattagggagcgtaag
agcatgtcgcaaagcggggtcagtaatggcggaactgcaattgaagtagaccctatgggg
aatagtaaccgtgggtcagagttgtttcttgatggttttccagttcaatttcaagacttc
tttgtgacatcactgggaaaaatcgacccacgtgtttcattccacacggcttcccaaatc
tggccaataggttacaaatctatttggcacgataatgcaacagggtccatattcgtatgc
aatgttttagatgctggtgattgtggcccaatattcagagtaaataggcatccatgcaca
aagcattcaatcccaaatgcttcaacggtgctctgcaggccaaaatctaggccgtccgat
ggaaaagacacggcaggtagtcatgattctgctgttaatagggcatttcaggcatttctt
gatgaacgaataaatacccgcgataaactagctgaacaacaaaagccaccgagcctagat
gatggtagttactcatgccttgataaggtagcaagctgtttgactacagaatccgccttt
cctcttcaatgtataccttctaataacgtcatccgaggtgacattattggtgaatttatg
gtagaagggagatccccttcatctgcttggcaaatggtcttagaaactctactttctgca
tgccatcaagcatttaaagatttgagtgtcttaactttttgctgcaaccacactgtcgat
aggcaacacattgatgattcatataatattaattcattagacaaatttggttatttgagg
ggtcctaaaatcgtgaacttaatacggacagtagagcagctcgatggttgttgtatggtg
ctgcggagatggttgcaaccagacagattcggtctagatgccgagtttgtacaagaactc
gtagaacagcttccgggggtttctgcctgtttgggatataaatctttggttgcaagatgt
caaaactctccccatactgtcggaagcggattctttacggttttacgtaaatatagttca
cagccgactgtatcagatagtctagtagaaaaccgtaaaagactcagcccaccaggcaat
ataattgcctccaaccttcctcctcgtttaattggggatattctccaggcccacgagttc
tacttgcggtttcataaagttttggggctagaggcacttccctctagagaaaagctggaa
tacgagttactgaatccatgggatgatgatttgaagccaccgaacagtcatgaaggtgac
aaaatagaagatcttacttcatattccacaattgcccctgatatgaaatcccgttttgga
gattttgtggatgcaacagaagaatctgagggagatggttctcgatcagaagtggctatc
aaatgcacaggtgtatcattagcgaactttcatatggcactcgtgaaggtgctagtagaa
gacatgctagcaaaactcacgatatgtgagcaatctggtgcagcggaatccaagtcaaga
aaagggaggaagaaaaacatggagatcatggtttctagcaagaagataaagctcagtatg
tttcctgttaacgaaattacttggccagaaatagcgaggaggtgcattttggctgtgttg
tccatggatggtagtcttgaagcttcggatgtcacaaaccgtgaatttagtgaagtgttt
cattgtttgaaaggtgatggcggtccactttgtggttctcttactggaatggctgcaatg
gaggctgatgcaatggttctagcagaggcctccgagaaaatattttcttctgtgaacagt
aaatttgtcaacttcataatagataaaaacgatctcaatatccgcgactccgccacagag
acaaatagaacagataacggatgtcctaaatggattgaggttctcgaacccgtaagaaag
ctacccacaaacgtgggagcaaaactgagaaaatgcgtttatgaatctttaaaacaacaa
ccaccaccgtgggcggtagagatgttggtaaactcgataagcaaagacgtctacaagggt
aatgcatccggacccacaaagaaaatcgttgtctcggttcttgaacatgtgagagaacta
aatcctctcactaagaagaaagcgaaggaaagtcgtgttgtcaggactttatatgacgtg
atcatgagacggtgtcgtatggtgctacgctcggttgctgctgaagatgaaaaccgagct
tttttcattctcatggcagaatcccttttcaagcggaatgaatcttgtgatggtggacat
cctgcaccagtttcccgcccgttagattttagaacgattgacctcagattggatgccggc
tgctatggtggttcacatgaatctttcattgaggatgttcgtgaggtttggcgaaattta
cgaataatatataggaacaaacccaaatacatcgactttattgaaacgttatctaaaaag
ctagaagaactgtatgaacaagaggtacttacactggtccgcaagaccgtcgattacggg
aacgattccatctccgatgaaacaaagagagagctaaacacgatgcttgcagacacaatc
acgagcacgctttccgttgcaccatgggaggacgggatttgcaaagtatgcgggaaggat
gaaaatgatcatatcttgcttttgtgtgatagatgtgatgcagagtaccatacatactgt
ttagatcctcccctccaaagggttccaaaagcaagttggtattgcccatcttgcatttcg
ttcattacaaatcaagctatgtcgtcacaagaagaggagtctgacaccccggtgttattc
cgggaccccgataagaagaaaacatgcaaagaaattgttcgaaatggtttagagtcgctg
gctgagttagctgatgctatggagtcgatggagtattgggaactaggcctcgaggagcgg
gttttccttctcaagttcttgtgtgacgaggccttgagttcgaccattattcgggaccac
ataaacgcagttgattgcaatattcgaagagacttcctgggccgagactcagaaggtaga
ctttactacattcttggcaaacccgaaagggtagttgtgtctggtccacacagtataggt
gaagtgtgtatagcctccgagagttcttcctctagagaactcgatgcatccgagcgttgt
tcatggatttgctatgaatcggatgctgaaatcgaggctctggttgaatggttgagagat
gacgatgcaagagagaaagaactgaaagaaaccatcatacagtggcaacgaaacaaatcg
aacaaccaaaatggtgaagccgggaaagttaaccgcttgatgtcatcgattcacgacacg
aatgcaagggcagcactggaaaagaaatttggttctttctcggaaggaagagtcttcgac
gatgggaaaatataccgttgtgattgcctggaattagttgggtctactagagctcattgt
ttttcatgccactcgacgtttttcagtaacgagattcacaacgatggaaaatgtgggatt
cataaggaaggagacgctctcgtgaagcaaccgaccttgactaatgatcagaatgaaccc
gatgtcacatttgtctttgaggagattagagccaatttctgtgccgaaagcttgcgtaaa
gaagtcatcaaagatgtagggatcgtcgggtcaaacaggaatccagtattggtcaaacat
cgagtcgaagctgagaacatcgagtcttcgacaccgttagttggcagagtttctaaaatt
cttcgatatctgaaagccactttactcgatattgaagccgctcttccaaacgaagcattt
agaccttcgagaagagactctcatagattacgagcttggcacgtgtttgtgaaatcggca
cagtcgattcatgagatggtacaagcaacgatcatcctagaagacatgattagaaccgag
cacctgagaaatgaatggtggtattggtcctcaccttccgctgctattaaaatctccact
gtttcatctctcgctctacgaatctacgctctcgatgctgccatcttttacgagaaccca
cctacgcctcctgcggacctgacagaacccgtaacgccatcagattccaattcaaagaaa
gaagcttctagaaagtcaaacccaaaatcaagcagctcgacaatggtggcaatgtcgaac
aattcagaaccttccaagacttcgaaatccggaaagaggccaaagaagaagaaacttaga
ttctccgcggattaa
DBGET
integrated database retrieval system
