Cynara cardunculus var. scolymus (artichoke): 112523023
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Entry
112523023 CDS
T05604
Name
(RefSeq) ABC transporter G family member 21
KO
K05681
ATP-binding cassette, subfamily G (WHITE), member 2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
ccav04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112523023
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
112523023
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112523023
04147 Exosome [BR:
ccav04147
]
112523023
04090 CD molecules [BR:
ccav04090
]
112523023
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
112523023
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of breast milk
112523023
CD molecules [BR:
ccav04090
]
Proteins
112523023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
ABC2_membrane_3
AAA_21
AAA_16
AAA_29
AAA_23
AAA_22
ABC2_membrane_2
AAA_25
AAA_33
RsgA_GTPase
nSTAND_NTPase5
TsaE
ABC_ATPase
nSTAND1
Motif
Other DBs
NCBI-GeneID:
112523023
NCBI-ProteinID:
XP_024988215
LinkDB
All DBs
Position
LG 12:complement(4757702..4760874)
Genome browser
AA seq
686 aa
AA seq
DB search
MPLLELEPSISGVAESPAATRSHVNTKIIMDKSTVHAEPPRESTTKNMDPTFESGSVANQ
NQSTPSQLPFLRESLRPITLKFEDLAYTINLQSGDDHCFTSPESKRTRTLLNGVSGVVRP
GELLAMLGPSGSGKTTLLTALGGRLPGKTSGSITYSGQPFSSSVKRKIGFVTQDDVLYPH
LSVLETLTYAALLRLPKNLTLEEKVEQAELIIVELGLSKCRNSIVGGPLIRGVSGGERKR
VSIGQEMLVNPSLLLLDEPTSGLDSTTALRLMATLKGLARGGRSVVTTIHQPSSRLYWMF
DKVVVLSDGFPIYSGQASRVMEYLASIGYVPGFNLMNPADFLLDLANGVAPSTNPEDHQQ
YNQGRPEDRNSVKQFLISSYKKTLHPLIKDDIHRNIHDTTRAIGGPKSSRRCDNIWTTSW
WTQFKVLFKRGLRERRHESYSGLRIFQVMSVSILSGLLWWHSDTSHLQDQVGLLFFFSIF
WGFYPLSNAIFTFPQERPMLTRERSSAMYRLSSYYFARMAGDLPMELVLPTVYVTITYWM
GGLKPSLTTFVLTVLIILFNVLVSQGLGLALGAILMDLKQATTLSSVIMLVFLLAGGYYI
QQIPSFISWLKYISFSHYCFKLLVEVQYSENEVYRCGIGTECRVVDFPGIKYLGIGHLWW
DVAALGVMLVGYRLLAYVALRMSKSH
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgccacttctcgagcttgagcccagtatttctggtgttgcagaaagtccagctgctact
agatctcatgttaacacaaaaattattatggacaagtccacagttcatgccgagccaccc
agggagtcgacgactaagaacatggaccctaccttcgaatctggatcagttgcaaatcaa
aatcaatccacaccatcacagctgccttttttacgcgaatctttacgcccgattacactc
aagtttgaggatttggcttacactataaacttgcaatctggagatgaccattgttttact
tcacctgaatcaaagagaacccggacccttctcaatggagttagtggagtagtccgacca
ggggaattactagccatgcttggaccatcagggagtggaaaaaccaccttactaactgcc
cttggtggtagacttcccggaaagacttcgggcagcataacctacagtggccagcccttc
tcaagctcggtgaaaagaaaaattggatttgtaacacaagatgatgtattatatccacac
ctctcggttttagaaactttaacctatgctgcgctgttgaggttgcctaagaatttgacc
ctagaagagaaagtagagcaagctgagctgatcatagtggaactcgggctaagtaagtgc
cgtaatagcatcgtgggagggccacttatacgtggggtttcaggtggggagagaaagcgg
gttagtattggacaagagatgttggtgaaccccagccttttgcttttggatgagcccaca
tctggcctggactccaccacggctctacggctaatggccacattgaaagggttggctcgt
ggagggaggagtgtggtgaccacgatccatcaaccatcaagtaggttgtattggatgttt
gataaggtcgtcgtgttatctgatggcttcccgatttacagtgggcaggctagccgggtt
atggagtatcttgcttccattgggtatgtgcccgggtttaacttgatgaatcctgctgat
tttctgcttgatcttgccaatggtgtggctccttctacaaacccagaggatcatcaacaa
tataatcaaggtagaccggaagatcgcaactcagtgaaacagttcctaatatcttcttac
aagaaaacccttcaccccctcattaaggacgacatccatagaaatatccatgacacaact
cgtgctattggaggaccaaaatcttcaagacgttgtgacaacatatggaccacaagttgg
tggacacaatttaaagtgttgttcaaaagaggtctgagagagaggaggcacgaatcgtac
tcgggtttacgaatcttccaagtgatgtctgtctcaatcttatcaggtcttctgtggtgg
cattctgatacatcacacttgcaagatcaggtgggacttctcttcttcttttcaatattt
tgggggttttaccctctatccaatgccatattcacattccctcaagagcggccaatgcta
acaagagaacgatcttctgcaatgtaccgtctatcctcttattacttcgctagaatggca
ggggacttgccgatggaactcgttctcccgacagtttatgtaacaattacctattggatg
ggtggcctcaaaccttcactcaccacatttgtgctaacagttctaatcattcttttcaac
gtgctcgtgtcacaaggacttggactagccctgggagccatacttatggacctaaaacaa
gcaaccaccttatcatcagtgatcatgctagtatttttacttgcaggtggttactatatt
caacaaattccatcattcatcagttggttgaaatacatctcatttagccattattgtttt
aagctgttagtggaagtgcaatacagcgaaaatgaggtttataggtgcgggataggcact
gagtgtagggttgtagattttccagggatcaagtatctgggtatcggtcacttgtggtgg
gatgtggccgctttgggtgtaatgttggttgggtacaggcttctggcttatgtagcactg
aggatgagcaaatctcactaa
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