Cynara cardunculus var. scolymus (artichoke): 112523033
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Entry
112523033 CDS
T05604
Name
(RefSeq) two-component response regulator ARR11
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112523033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112523033
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
112523033
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
112523033
NCBI-ProteinID:
XP_024988229
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Position
LG 12:complement(675140..679266)
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AA seq
556 aa
AA seq
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MTEGINGFSSPRADVFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAIEALDLLR
ERKDGFDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMRGIQHGACDYLL
KPIRMKELRNIWQHVYRKKIHEVRDTESHEGLEEMLMMRNVSEQSDDGYMLCGSDMTPGK
KRKDAEHKYDDKDFADHSSVKKARVVWTVELHQKFVKAVNHIGFEKVGPKKILDLMNVPW
LTRENVASHLQKYRLYLTRLQKDDLKTSSSGLKHPDFSPRDAAGDRADHIKMQQNEANSY
RAPSNLLLQNANSRIHEVDLKGTASLQTIEPKKVLTGFAAKSHKASSSNIGISHSFGSTQ
YSTYNSVLPTQYSWNEGFTEIQFKQERNPQFQVENGFADLGLPTLQQHNQVNLQPMQSIA
NGLFSKERDKQAKSSSGTKSSFGSYSVPSQNLTPSFQPPDPSFQPPDPVTSSTWSLKDDH
SLEQTSIHNLELSAFFLQGQHCSSTNLDMQNKVPECNDPEFIAEVPSNLYDALRFDYEYP
PDSLEYPVIDQGLFIV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaggaataaacggattttcatcaccgagagcggatgtttttccggcaggactt
cgtgtacttgtcgtcgatgatgatcctacttggttgaaaatactcgagaagatgcttaag
aagtgctcgtatgaagttactacatgtggactagctatagaggctctggatctgcttcgg
gaaagaaaagatgggtttgacattgtaattagtgatgttaacatgcctgacatggatggt
ttcaagcttttggagcatgttgggcttgagatggaccttcctgtcattatgatgtctgtt
gatggagaaacaagcagagttatgagaggtatccaacacggggcttgtgattatcttctg
aagccaattcgaatgaaggaactaagaaacatatggcagcatgtttacaggaaaaagata
catgaggtgagagatactgaaagtcatgaaggccttgaagagatgctgatgatgagaaat
gtgtctgaacaatctgatgatggatacatgctttgtgggagtgacatgacaccaggtaag
aaaagaaaagatgctgaacataagtacgatgacaaagacttcgccgaccattcttcagtc
aagaaagcaagagttgtttggactgtggaacttcaccagaaatttgtcaaagctgtgaac
catattggttttgaaaaagttggtcctaagaaaatactcgacctcatgaatgtcccatgg
ttaacaagagagaatgttgcaagccacttgcagaaatatcgcctctacttaactaggtta
cagaaagatgatctaaaaacatcatctagtgggctaaagcacccagatttctctccaaga
gatgcagctggagaccgtgcggatcatataaagatgcaacaaaatgaagctaatagctac
cgagctcccagcaaccttcttctccagaatgctaattccagaatccatgaagttgatctc
aaaggtactgcttcattgcagacaatagaacccaaaaaagtattaactggttttgcagcc
aagagtcacaaggccagcagttcaaacattggaattagccattcttttggatcaacgcag
tactcaacatataattctgtgttgccaactcagtactcatggaatgaaggttttacagaa
atccagttcaaacaagaacgcaacccacagtttcaggtggaaaatggctttgccgatctg
ggactgcctactctccaacaacacaaccaagtaaatttgcagccgatgcagtccattgca
aatggacttttcagtaaagaaagagacaaacaggcaaaatcaagcagtggaaccaagtca
tcttttggctcctactctgtgccatcccagaaccttacgccaagtttccaacctcctgat
ccaagtttccaacctcctgatcctgtcaccagttcaacatggagcctgaaagatgatcac
agtttagaacaaacttccatacataatctggaattgtccgcttttttccttcagggtcag
cattgctcttcaacaaatctcgacatgcaaaacaaagtgcccgagtgtaatgatccagag
ttcattgctgaagttccttcaaacttgtatgatgcactaagatttgactatgagtatcct
cctgactcattggaatatcctgtaatagatcaaggcctattcatagtctga
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