Cynara cardunculus var. scolymus (artichoke): 112523095
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Entry
112523095 CDS
T05604
Name
(RefSeq) receptor protein kinase TMK1-like
KO
K00924
receptor protein kinase TMK [EC:
2.7.11.1
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112523095
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccav01001
]
112523095
Enzymes [BR:
ccav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112523095
Protein kinases [BR:
ccav01001
]
Serine/threonine kinases: TKL group
IRAK family
112523095
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_4
LRR_8
LRR_1
LRRNT_2
ABC1
Syndecan
LRR_ComC
LRR_14
APH
Motif
Other DBs
NCBI-GeneID:
112523095
NCBI-ProteinID:
XP_024988305
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Position
LG 12:5266552..5269998
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AA seq
943 aa
AA seq
DB search
MKKPHLGIETRPRFLLFIFDILTVYVIYVHSQSTSDDTAVMQALKKNLQPLSSLNWSDPN
PCNWDRVECSKVNRVTGIQVGNQNLKGTLPQSLNNLTELHVLEFQNNQLTGPLPSLSGLS
QLQNLLLANNKFSSIPSDFFNGMSSLQNVYLDYNAFTAWSIPESLKTASNLKTFSATSTN
LTGKLPDFFGGDTFPGLITLRLAFNYLEGGLPNSFPGSSIQSLWLNGQKSDSRLNGSIEV
LQNMTQLTEVWLHSNLFSGPLPDFSGLNKLQNLSLRENSFTGPVPASLVGLQSLKVVNLT
KNMLQGPMPKFDRSVDVDMSEIDSFCLPDPGVNCDARVDILLSVVGSVGYPQGFASNWKG
NDPCKSWLGITCSSDGNITVVNFRGMGLTGTISSDLSSIKMLQRLILADNNLTGVIPNEL
KDLPNLVEIDVSNNQLYGQIPSFKETVKVKTDGNTNIGKDGPSLTPVSPSNGSPDSPGVR
HGAGGGRSSSTGVVVGSVIGCLCAILLVGLLIFYVYRAKRKRSGSLPYQNTMVIHPRHSG
SDGDGVKITIAGSSANGGSSEANSHTSSGTRDIHVIETGSMVISIQVLKNVTNNFSPDNV
LGRGGFGTVYKGELHDGTKIAVKRMESGVMSEKGLDEFKSEITVLTKVRHRHLVALLGYC
LDGNERLLVYEYMPQGTLSRFLFNWQNENLKPLEWTKRLIIALDVGRGVEYLHGLAQQSF
IHRDLKPSNILLGDDMHAKVADFGLVRLAPDGKASLITRLAGTFGYLAPEYAVTGRLTTK
VDVFSFGVILMELITGRRALDETQPDESIHLVQWFRKMHINKDTFRKAIDPALDLDEEAL
ASVGKVAELAGHCCAREPYQRPEMSHVVNVLSSLAELWKPSELDPDEIYGIDLNTTLPQA
VKKWQELEGMSGIDDSLVIGSGESTQTSIPSQPSGFGNSFMLR
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaccccatctgggtattgaaacccgacctcgatttctcctcttcatcttcgac
atccttactgtttatgtcatctatgttcactctcagtcgacttccgacgatactgctgta
atgcaggctctaaagaaaaatctccaaccactgagttcactcaattggtccgacccgaat
ccatgcaactgggaccgagtcgaatgctccaaagtcaaccgggtcaccggaattcaagtc
ggtaaccagaacctcaaaggcactctccctcaatccctcaataacctcacggaactccac
gttttggagtttcaaaacaatcaactcactgggccactccccagtctctccgggttgagt
cagctccagaacctactgctcgctaacaacaaattctcttcaataccgtcggatttcttc
aatggtatgtcttctttgcaaaacgtttatttggattacaatgcgtttactgcatggtct
atcccagagagcttaaaaactgcatcgaacttaaaaactttctcggcgacgtccacgaat
cttaccggaaaactaccggattttttcggcggtgatacttttccggggctaattactttg
cgtttagctttcaattatcttgaaggcgggttacccaattcgtttccgggttcgtccata
cagagcctgtggttaaatggacagaaaagtgattctaggctaaatggaagcattgaagtt
ttacagaatatgacacaattgactgaagtttggcttcattccaacttgttttcgggtcct
ttaccagatttttcgggtttaaacaagttgcagaatttgagtttgagagagaatagtttc
acaggtcctgtgccagcatctttggtaggtttgcagtctttaaaagttgtgaatttgact
aagaacatgttacaggggccaatgccaaagttcgatagatcggttgatgtggatatgagt
gagattgatagtttttgtttgcctgatcctggtgtcaattgtgatgcccgtgttgatatc
ttgctttcggtggttggatctgtgggttatcctcaaggttttgctagtaattggaagggt
aatgatccgtgtaaatcgtggttgggaattacttgttcgagtgacgggaatattacggtc
gttaacttccggggaatgggtctcacgggcaccatttcatcggatttatcttcgattaag
atgctgcaaagattgattcttgcagacaataatcttactggggttatacctaatgaactt
aaagatttgccaaatcttgtagagatagatgtttcaaacaatcaactttatggccaaatt
ccttcttttaaagaaactgttaaggtgaaaaccgatgggaatacgaatattgggaaagat
ggtcccagtttaacaccggtttcaccttctaatggttcaccggactcgcctggtgttaga
catggcgctggtggtggcagaagttcctccactggggtggttgtgggatctgttatcggc
tgtctttgtgcaattttgttagtggggttgctaattttttatgtctacagagcgaaaaga
aagcgttctggtagtctgccttatcagaacacgatggtcatacatccccgccattcaggg
tctgatggtgatggggtcaagatcacgattgccggttcaagtgctaacggtgggtcgagt
gaagcaaacagtcacacaagtagtggaactagagatattcatgttatcgaaacaggtagt
atggtaatttcaatccaggttttgaagaacgtgacgaacaattttagcccggacaacgtt
cttggaagaggagggtttggaacagtttacaaaggcgaattacatgatggaactaagatt
gccgtaaagcggatggagtcaggagtaatgagcgaaaagggattggatgagtttaaatcg
gaaatcaccgtgcttaccaaggttcgacaccggcatttggtagcacttctcggatactgt
ttggatggaaacgagcgactacttgtttacgaatatatgcctcaggggacacttagtcgg
tttctgtttaactggcaaaatgaaaatttgaagcctctcgaatggaccaaaagattaata
atcgctttggatgttggtagaggtgtcgaatatttacatggtttagcacagcagagtttc
atccatcgggatcttaaaccgtccaacattcttcttggcgatgatatgcacgccaaagtt
gcggactttggactcgttcggcttgcccctgacggtaaagcttcactcatcacaagattg
gccggaactttcggctatcttgcaccggaatatgcagtgacgggtcgactgactaccaaa
gtcgacgtgttcagcttcggtgtaatcttgatggagttgatcacagggcgaagagcgctt
gatgaaacccaaccagacgagagtattcatctggttcagtggtttcgcaaaatgcacatc
aataaggacaccttcagaaaagccatagacccggcacttgacctcgacgaagaagctctt
gcgagtgtcggcaaggtggctgagctagccggtcactgctgcgctcgagaaccctaccag
agacctgaaatgagccatgtggtcaacgtgctgtcatctctagccgagctttggaagcca
tctgaactggaccctgatgagatatatggaatcgatctcaatacaactttgcctcaggcc
gtaaagaagtggcaagagttggaaggaatgagcgggattgacgattcgttggttattggg
agtggtgaaagcacgcaaacgagcataccgagtcaaccatcaggctttggtaattcgttc
atgttacggtga
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