Cynara cardunculus var. scolymus (artichoke): 112523104
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Entry
112523104 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112523104
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112523104
Enzymes [BR:
ccav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
112523104
Ribosome biogenesis [BR:
ccav03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
112523104
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Radical_SAM_2
DUF870
Motif
Other DBs
NCBI-GeneID:
112523104
NCBI-ProteinID:
XP_024988316
LinkDB
All DBs
Position
LG 12:1036473..1042862
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AA seq
471 aa
AA seq
DB search
MEMSYCIWMRRVKMATTTTAAASSSVFRPTTASSISPLFTPSSSKPTPPLLSHLFHRHSS
ISTTATPQSSRFPISQTLDHNCSSSSGAEDGGINPKDSQKILLKGMRYKELENWVISKGY
RSAQALMLWKLLYGNNSNSIWAHSFDELEGLNKDLSMMLSKYAKLKALQVKDIVIASDGT
RKILFMLDDGLVIETVIIPNGDRGRNTVCVSSQVGCAMNCQFCFTGRMGLRRNLTAAEIV
EQAVFARRLFTSEVGSIRNVVFMGMGEPLQNIENVMKAADIMVDEQGLHFSPNKVTISTS
GLVPQMKRFLRESKCALAVSLNATTDEVRNWIMPINRKYNLSLLLDTLREELRLKHKYKV
LFEYVMLAGVNDSIDDAKRIVDLVEGIPCKINLITFNPHSGSHFHPTTDKKMVEFRNTLA
EGGCRVFMRPSRGDDQMAACGQLGNPGDFQAPLLKVPPRFQPALEPSVRSL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggagatgagctactgtatctggatgaggcgagtaaagatggcgaccaccaccaccgcc
gccgcctcctcctccgtcttccgccccaccaccgcctcttctatttcaccgctattcact
ccgtcttcttccaaaccaacaccaccacttctttctcatttatttcatcgacacagttca
atttcaactactgcaactcctcagtcctctcgatttccgatttcccaaaccctagaccac
aattgttcatcttcgtcaggtgctgaagatggtggaattaatcctaaggattcccaaaag
attcttctgaaaggaatgcgatacaaagaactcgaaaattgggtgatttcaaaaggatat
agatctgctcaagctttgatgttatggaagctgctttatggaaacaattcaaacagcatt
tgggcacattccttcgatgaattggaaggtttaaacaaagatctttcgatgatgttgagt
aaatatgctaaattgaaggcactacaagtgaaagatatcgttatagcctctgatggcact
aggaagattttgtttatgttggatgatggattggtaatagagacggtcattatacctaat
ggcgatagggggcggaatacggtgtgtgtttcaagtcaagtcggctgtgcaatgaactgt
caattctgctttaccggcaggatgggtttgagaagaaatctaactgcggcagaaatagta
gaacaggcggtcttcgctcggcgcctgtttacgagtgaagttggttccatcagaaatgtt
gttttcatggggatgggagagccacttcaaaacatcgaaaacgtgatgaaagccgcagat
ataatggtggacgagcaagggcttcatttcagcccgaataaagttaccatttcaacaagt
gggctcgtaccccagatgaaacgcttccttcgtgagtctaaatgtgctttagccgttagc
ctgaatgctacaaccgatgaagttaggaactggatcatgcccattaatcgcaagtacaat
ttgagtttgcttctcgatacccttcgtgaagagcttcgcttgaaacacaaatacaaagtc
ttatttgaatacgtgatgcttgctggagtcaacgacagcatcgatgatgcaaagagaata
gtcgatcttgttgaaggcattccttgcaagatcaacctgatcacgttcaacccgcacagt
gggtcccacttccatccgacaacggacaagaagatggtcgagtttagaaatacattggct
gagggtggttgtcgtgttttcatgagaccgagtagaggagatgaccaaatggctgcatgt
ggtcagctcgggaacccaggtgacttccaagctcctttactcaaagtgccaccaaggttt
caacccgcgctcgagccttccgtacgatcgttgtaa
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