Cynara cardunculus var. scolymus (artichoke): 112523122
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Entry
112523122 CDS
T05604
Name
(RefSeq) myosin-12-like isoform X1
KO
K10357
myosin V
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112523122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112523122
04131 Membrane trafficking [BR:
ccav04131
]
112523122
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112523122
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112523122
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112523122
mRNA cycle factors
P-body specific factors
112523122
Membrane trafficking [BR:
ccav04131
]
Others
Actin-binding proteins
Myosins
112523122
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112523122
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112523122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Hpr_kinase_C
TSC22
AAA_22
IQ
AAA_16
bZIP_1
Phage_TTP_15
nSTAND3
Cbl_N
Motif
Other DBs
NCBI-GeneID:
112523122
NCBI-ProteinID:
XP_024988349
LinkDB
All DBs
Position
LG 12:9245348..9257597
Genome browser
AA seq
1518 aa
AA seq
DB search
MIVDISKIYPKDTEAPPAGVDDMTKLAYLHEPGVLYNLSARFALNEIYTYTGNILIAVNP
FRRLPHLYDVHMMEQYKGTAFGELSPHLFAVADDCYRAMIHEHGSQSILVSGESGAGKTE
TTKMLMRYLAFMGGRSRTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFD
KQGKISGAAVRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDAKKFKLGDPRTFHYLNQ
TNCYEVANIDDGREYLETRNAMDVVGISQEEQDAIFRVVAAILHLGNIEFMKGKEADSSK
IKNEKSLYHLRTAAELLMCNEKSLEESLCERVIVTPDGNITKPLDPASAALSRDALAKTV
YSRLFDWIVDKINNSIGQDPNAKSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQ
HVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKATHETFAQR
MYQSYKAHKRFSKPKLSRTNFTINHYAGDVTYQADHFLDKNKDYVIAEHQALLDASKCPF
VANLFPSLAEETSKQSKFSSIGTRFKQQLQSLMETLSTTEPHYIRCVKPNTVLKPGIFEN
DNVLNQLRCGGVLEAIRISCAGYPTKRAFVEFLERFGMLAPEVLHGCDEKSACAAICDRF
GLKGYQIGKSKVFLRAGQMAELDARRTEVLTTAARKIQRQIQTYLMHKEFITLKRATIDV
QKLWRARLAHKLYDYLRKEAASIRIQKYHRGRTSRMAYKHLQEATLSVQTGLRAMAARDE
YRHRRRNKAATIIQTEWRRFYALSAYKHQKKATLTLQCLWRSKVARKELKMLKMAARDAG
ALREAKDKLEKRVEELTWRLDFEKHLRVDLEETKGQEITKLQNILQEMQGKLEEAHNQII
CEKEAAKLAIEQAPPVIKEVTIQDNTKVEELTNQNHELENEILELKKRVEEFEQKYHEVE
NKSRGILKVLEDSQLKVSQLQETIERLDVNSSTLESENQVLRQQALVASTNEDLYEETER
LRSKIKELESENKYLQNQTTVVEVVKLITTTEKVLPQLQSSVNGHGMEDSFEAPDAEQEK
TKESSNDVSFLTKQKSLTGRQQENHDVLIKCLLEDKQFDKTRSVAACTVYKTLLQWRSFE
AEKTQIFDRIIHTIRSAIEDNIKDLAYWLSTTSTLLFLLQSTIKASGSPYKSPQRNRFSP
STLFGSMAQGFLVSPMAMGSSSGYSGMEGKPSAQSKIEAKYPALLFKQHLTACAEKLYGM
IRDSLKKEISPFLNSCIQAPRSTRVGSIRRASRNILSNIMAKQQASSIHWQSIVNSLDHI
LCILSENYVPSIITRKIFSQIFSFIDVQLFNSLLLRRECCSFSNGEYLKSGLHELELWCT
KATDQFAGWSWDGLHHIRQAVGFLVSHQKTQKSLEELTNELCPMLSIPQIYRIGTMFWDD
KYGTQGLSQEAIGKMRSLMAEDSISMPNNSFLLDVDSSIPFSVEEISQSYQDFNLSDMDP
PPLLRQRSDFHFLLQQTE
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgatagtagatatttccaaaatatacccaaaggacacagaggcaccccctgcaggggtt
gatgacatgaccaagttagcttacctccatgagccaggagttctttacaacctttctgct
cggtttgctctcaatgaaatatacacttacacagggaacattctgatagcagtgaaccca
ttcaggagacttccacatttgtatgatgtccatatgatggagcagtataaaggaacggct
tttggggagttaagccctcatctttttgccgttgcagatgactgttacagagcaatgatc
catgaacatggaagtcagtctatcttagtgagcggagagagtggtgcagggaaaacggag
acgacgaaaatgttaatgagatatcttgctttcatgggaggcagatccagaactgaagga
agaacagttgaacaacaagttctggagtccaacccagtactggaagcctttgggaatgcc
aaaactgtcaagaacaacaattccagtcgttttggtaaatttgtagagatccagttcgac
aagcaaggaaagatatctggggctgcagtcaggacttaccttcttgaaagatcgcgtgtt
tgccaagtttctgacccagaaaggaactaccattgtttctacatgctctgcgcagcacca
cctgaggatgccaagaagttcaaactaggagatccaagaacattccactatttgaaccaa
actaattgctatgaagtagcaaacatagatgatggaagggagtatttggaaacaagaaat
gcaatggatgttgtggggatcagccaggaagagcaggatgctatattccgcgttgtagct
gcaattcttcatctggggaacattgaattcatgaaggggaaggaagctgattcttctaaa
ataaaaaatgagaagtcactctatcatcttcgtactgcagcagagctactcatgtgcaac
gaaaaatcacttgaagaatcactttgtgaacgtgttattgtaactcctgatggaaacatt
acaaaaccactggatccagcctcagctgctttgagtcgtgatgccctggcaaaaacagtt
tactccagactgtttgattggattgtggacaagataaacaattcaattggtcaagatcca
aatgcaaaaagtataattggggtccttgatatctacggttttgaaagcttcaagattaac
agctttgagcaattgtgcatcaacctgacaaatgaaaagttgcaacagcattttaatcag
catgtattcaagatggaacaagaagaatacacaaaggaggaaatcaactggagctatgta
gaattcgtagataatcaagatgttttagatctcattgaaaagaaacctgggggtatcatt
gctcttctagatgaagcatgtatgtttccaaaggccacacacgagacatttgcgcaaaga
atgtaccagtcttataaagcacacaaacgattcagtaagccaaaactttcgagaacaaat
ttcacgatcaaccattatgctggagatgttacttaccaagcagaccacttcctcgacaag
aacaaggattatgttatagcagaacaccaagccctgttggatgcctcaaagtgccctttt
gtggcgaatcttttcccatcattagctgaggaaacatctaaacaatccaaattttcttca
attggaactcgctttaagcaacaattacaatctctaatggaaaccctgagcactacagag
ccacattacatcagatgtgtaaagcctaatacggtcttgaagccagggatatttgaaaat
gacaacgttttaaatcagttaagatgtggaggtgtactagaggcaattagaataagctgt
gctggttatccaacaaaaagagcttttgttgagttcctggaacgatttggaatgttggct
ccagaagttctacatggatgtgatgagaaatcagcatgtgcagcaatttgtgacagattt
ggactgaagggttatcagataggcaaaagcaaggtttttctaagagctggacagatggcc
gaattagatgcacgaagaactgaagttctgacaacagcagcaaggaaaattcagaggcaa
atccaaacatatctcatgcataaagagttcattacccttaaaagggccacaatcgatgta
caaaagctatggagagcaagacttgcacataagctatatgactacttgaggaaggaagcg
gcatctatccgaatacagaagtatcatcgtggtcgtacatcaagaatggcgtacaagcac
ttacaggaagcgacactatctgttcaaactgggttaagggcaatggctgcccgagatgag
tatagacacagaagaaggaacaaggctgcaactataattcagacagaatggcggagattt
tatgctctttctgcatataagcatcagaagaaagcaactcttacacttcaatgtctttgg
agatcaaaggtagcaaggaaggaattaaaaatgttgaagatggctgcaagagatgctggg
gcccttagagaagctaaggacaagctagagaagcgtgttgaagaattaacatggagacta
gactttgaaaagcacttgagggttgatctcgaagaaacaaagggacaagaaattacaaag
ttacagaatattttgcaagaaatgcaagggaagctggaagaagcacacaaccaaatcatt
tgcgagaaagaagcagcaaaattggctattgaacaagcacctccagtcatcaaagaagta
acaatccaagacaacaccaaagtggaagaattaactaatcaaaatcatgaactagagaat
gaaattttagagctgaagaaaagagttgaagagtttgagcagaagtaccatgaagttgaa
aacaagagcagaggtatacttaaagtgctggaagattcacagcttaaagtctcacaactt
caggaaaccattgaaagattagatgtgaattcatccaccctcgaatcagagaatcaggtt
ctgcgtcaacaagcattggttgcttcaacaaatgaggacctctatgaagaaaccgaacgc
ctccgaagcaagatcaaagaattagagtcagagaataagtaccttcagaaccaaacaacg
gttgtggaggttgtaaaactgataaccacaacagaaaaggttttgccacaactacagagt
tcggttaatggacatggaatggaagacagctttgaagcacctgatgcagagcaagaaaag
acaaaagagtccagcaatgatgtatccttcctaactaaacaaaaatcactaacaggcagg
cagcaggagaaccatgatgtactgatcaagtgtctgctggaagacaagcaatttgacaag
accagatctgttgcagcttgcactgtgtacaaaacattacttcagtggaggtcctttgag
gcagaaaagacacaaatatttgatagaattattcacacaattcgatcggctatagaggat
aacatcaaagatttagcatactggctatcaacaacttcaactcttttgttcctgctacaa
agtacaatcaaggcaagtggttcaccctataaatctccacaacgcaatcgcttctcgccc
tccacattgtttggtagcatggcacaaggtttccttgtatctcctatggccatgggtagc
tctagtgggtatagtggaatggaaggaaagccaagtgcacaatccaaaatagaagccaag
tatcctgcgcttttgttcaagcaacacctaacagcctgtgccgaaaaattgtatggaatg
attcgtgatagcttgaagaaagagataagtccatttctgaactcatgtatacaggcacca
agatccacaagggtcggatcgataagaagggcatcaagaaacatcctttcaaatattatg
gcaaaacaacaggcatcaagcatacactggcaaagcattgttaatagcttggatcacatc
ttgtgcattctgtctgaaaactatgttccttcaataatcacaaggaaaattttcagtcag
atattctcattcatagatgtccagcttttcaatagcttactgcttcgacgtgaatgctgc
tcgtttagcaatggtgaatacctaaagtcaggtttgcatgaacttgagctgtggtgcacg
aaagcaacagaccagtttgctggatggtcatgggatggactacatcacataaggcaagct
gttggatttctggtatcacaccaaaaaactcagaagtccttggaggagcttacaaatgaa
ctctgcccgatgttgagcattccacaaatatatcgtattggaactatgttttgggatgac
aaatatggaacccaaggcttatcccaggaggcaattggcaagatgagatcactaatggca
gaagattcaatcagcatgcccaacaattctttcttgcttgatgtagattccagcatacca
ttctctgtggaagaaatatcacagagttaccaagatttcaacttgtctgatatggatcca
ccacctctcctccgccagagatcggattttcatttcctgttgcagcaaacagagtga
DBGET
integrated database retrieval system
