Cynara cardunculus var. scolymus (artichoke): 112523244
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Entry
112523244 CDS
T05604
Name
(RefSeq) tryptophan synthase beta chain 1-like
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00260
Glycine, serine and threonine metabolism
ccav00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
ccav01230
Biosynthesis of amino acids
Module
ccav_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
112523244
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
112523244
Enzymes [BR:
ccav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
112523244
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Gene cluster
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Motif
Pfam:
PALP
DUF7117
Motif
Other DBs
NCBI-GeneID:
112523244
NCBI-ProteinID:
XP_024988534
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Position
LG 12:6165811..6169394
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AA seq
439 aa
AA seq
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MAFSVQKLSIPYVGEVVVPNLEPVNLNTNLNFRSKSCTKTLSTVPMETTPTPTTGKFGRF
GGKFVGEVLIAPLAELEAKFNSLLHDQEFKMELATALKDYVGRETPLYHAQKLTDHYKNI
NGEGPEIYLKREDLNHGGSYKMNNVIAQAILAKRMGRKSVITATSADRHGVATAAVCAKF
SLDCTIFMGTRDMRRKPSNLQLMKLLGARVKLVDGSFQAAASESMREWLGNLETEYYLSG
TAVGPHPIPTMVREFNSIIGQETRKQAMEKWGGKPDVLVACVGSGCNALGLFHEFMSDES
VRMIGVEGGGGDELHCASLVRGEIGVYHGAMCYLLQDEQGHITTTHSVASGLEYPGVSPE
LSFLKDAGRVECYRVTDQEALDAYKRLCCLEGIIPALEASHALAYLEKLCPTLPRGTKVV
VNCCGSGYNDAPIVLNDMP
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcattcagtgtccaaaagctttcaatcccttatgttggggaagtggtagtaccaaac
cttgagcctgtgaatttgaacacaaacctaaattttagaagtaaatcttgtacaaagaca
ctaagtactgtgcccatggagactactccgactccgaccaccggaaagtttggaaggttt
ggggggaagtttgtcggcgaagtcctcatcgctccattagccgaactcgaagctaagttc
aactcacttttgcatgatcaagagtttaagatggaactagccactgcactgaaggattac
gtaggacgcgaaactcctctctaccatgcccaaaagctcacagatcattacaagaacatc
aatggagaagggcccgaaatctatctcaaaagagaggatctcaaccatggaggatcttac
aagatgaacaatgtcatcgcacaagcaattttggccaaacgtatgggtcgaaaaagcgtt
ataacagccacaagcgccgaccgccatggtgtcgcaacggctgcggtgtgcgccaagttc
tcgttagattgtaccattttcatgggaacccgagacatgaggcgaaaaccctccaacttg
caactcatgaagctgcttggagctagggttaagcttgtggatggaagttttcaggcagca
gcttcagaatcaatgagggaatggctaggaaacctagaaaccgaatactacctttctgga
acggctgtgggaccgcacccaatcccgaccatggttcgtgaattcaattcgattatcgga
caagaaacaagaaagcaagcaatggagaaatggggtgggaaaccagatgtgttggttgct
tgtgtagggagtggttgcaatgcattaggtctgtttcatgagttcatgagtgacgaaagt
gtaaggatgattggagttgagggtggtggtggggatgagttgcattgtgcaagtcttgta
agaggtgaaattggtgtttatcatggagccatgtgttatttgcttcaagatgaacaaggc
catatcacaacgacacactctgtggctagtggattggagtacccaggagtaagcccagag
ctaagctttctaaaagatgctggcagagttgagtgctacagagtcactgatcaagaagct
ctagatgcatacaaaagactatgttgtcttgaaggtataattccagcactggaagcctct
catgcgttggcgtatctcgaaaagctttgccctacactgcctcgtggcaccaaggttgtg
gttaactgttgtggctccgggtacaacgacgcccccatagtcttgaacgacatgccttaa
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