KEGG   Cynara cardunculus var. scolymus (artichoke): 112523273
Entry
112523273         CDS       T05604                                 
Name
(RefSeq) splicing factor 3B subunit 2-like
  KO
K12829  splicing factor 3B subunit 2
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112523273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccav03041]
    112523273
Spliceosome [BR:ccav03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112523273
 Complex B
    112523273
 Complex C
   U2 SnRNP specific factors
    112523273
SSDB
Motif
Pfam: DUF382 PSP Prion_octapep
Other DBs
NCBI-GeneID: 112523273
NCBI-ProteinID: XP_024988570
LinkDB
Position
LG 12:complement(25478670..25490685)
AA seq 585 aa
MTVGVSDGGMDSHTNKDLKSKEGNNQTSKKSREAERRRRRRKQKKNKPLSRDETGSKVDE
NGDGITGDDSGIQNSNPQKVMEQVEIEYIPEKAELDGDLDDEFRKVFEKFTFKESAASEE
NDKSEGAAVTAVSNKKASSDSEEEEQDDQQKEKGGISNKKKKLQRRMKIAELKQISSRPD
VVEVWDATSADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGI
EKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHE
GKEFEVKLREMKPGTLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIP
PGASFGYHPGGWGKPPVDEFGRPVYGDVFGQQEEPPNYEEEPVDKSKHWGDLEEEEEEEE
EEEEMEEQYEEEELEDGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPEKPLYQVLEEKEE
KIAPGTLLGTTHTYVIGGAPQDKPAGKRVDLLRGQKTDRVDVSLQPEELEAMENVLPAKY
EEAREEEKLRSQREDFSDMVAENEKKRKRKMQEKDSKSKKKDFKF
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgacagtcggagtttcagacggcggaatggactctcacacaaacaaagacttaaaatct
aaggagggcaacaaccagacgtccaagaaatcgcgcgaggctgaacgccgtcggaggcgg
cggaagcagaagaaaaacaagcccctcagtcgagacgagacgggcagtaaagtcgatgag
aatggtgatggaattaccggagacgatagcggaatacagaactccaatcctcagaaggtt
atggagcaagttgaaatagagtatatccctgaaaaagcagaactagatggtgacttggat
gatgaattcagaaaagtgtttgagaaattcacttttaaagaatctgctgcttctgaggag
aacgataagagtgaaggggctgctgtcactgcagtatcaaataagaaagctagttcagat
tcagaggaagaagaacaagatgaccaacagaaggagaaaggtggcatatctaataaaaag
aaaaagcttcagcgccggatgaagattgctgaactcaagcagattagttccaggccagat
gtagtcgaggtgtgggatgctacctcagctgaccctaaattgctggttttcctcaaatca
tatcgcaatactgttccagtgccaagacattggtgccagaaaagaaaatttttacagggg
aaacggggtattgagaaacagccatttcaacttcctgactttattgctgccacaggaatt
gagaaaattagacaggcttatattgaaaaggaggatagtaagaagcttaaacagaagcaa
cgtgagcgaatgcagccaaaaatgggaaagatggatatcgattatcaggtactccatgat
gcttttttcaaataccagactaagccaaaattgacttcacatggtgatctctatcatgaa
ggaaaagagtttgaggtaaaacttagagagatgaagccaggtaccttatcacaggaacta
aaagaagcgctgggaatgccagaaggtgctcctcccccatggcttattaatatgcagaga
tatggtcctccaccttcttatccacatttaaagattccaggattgaatgctcctattcca
cctggggctagctttggttatcatcctggtggttggggaaagccacctgttgatgagttt
gggcggccagtctatggggatgtttttgggcaacaagaagaaccacccaattatgaggaa
gagccagtcgataagagtaagcattggggtgatttagaggaagaagaagaggaggaggag
gaagaagaagaaatggaagagcaatatgaggaagaggaattggaggatggcattcagtcg
gttgatagtctctctagtaccccaactggcgtagagactccagatgtgatcgaccttcgc
aaacagcaaaggaaagaacctgagaaaccgctttaccaagtgttggaagaaaaagaagag
aagatagctccaggaaccttgttgggaacaacacatacctacgtgataggtggtgcccca
caagacaagccggcaggcaaaagggttgatttgcttagaggtcaaaaaacagatagggtg
gatgtgtctttacagcctgaagagttggaggcaatggagaatgtgttgcctgccaaatat
gaggaagcccgtgaggaagagaagctgcgtagtcaacgggaagacttcagtgacatggtt
gcagagaatgaaaagaagaggaagagaaagatgcaggagaaagacagcaagtcaaagaaa
aaggatttcaagttttag

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