Cynara cardunculus var. scolymus (artichoke): 112523349
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Entry
112523349 CDS
T05604
Name
(RefSeq) U-box domain-containing protein 14
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112523349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112523349
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112523349
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
U-box type E3
112523349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
zf-Nse
HEAT_2
ARMC9_ARM
Cnd1
KAP
Neurochondrin
Arm_2
zf-RING_UBOX
zf-C3HC4_4
MLKL_N
Motif
Other DBs
NCBI-GeneID:
112523349
NCBI-ProteinID:
XP_024988685
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All DBs
Position
LG 1:6057659..6060765
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AA seq
622 aa
AA seq
DB search
MANQEGGDLVTQLVDLVKEISGLPDCRNAVRKMYGNLMRRVKLLSPLFEELKDNEPQLDD
GDRKGLQALRNALNLALELLKLVNDGSKIFQALQFDKTAGKFHVVTTQIEEALSQIHYDR
FNLSEEVHEQIKLVHGQFRRAKGRMDSPDLQLQRDLAMVSKGNDPDPETVKRLSEKLYLT
MVNDLKRESIAIHDMAILSGGDPEERFEMMSFLLKKIKDLVMLGNPEVDTSDGEKSMKHR
SPVIPDDFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKMCPKTQQTLLHTALTPN
YVLKSLIALWCDSNGVELPKSDNKPRRTGSECDRTVIGSLLQKLVIGDSDEQRSAAGELR
LLAKRNADNRVCIAEAGAIPLLVELLSSHDGRTQEHAVTALLNLSINEANKGIIVSVGAI
PDIVDVLKNGSTEARENAAATLFSLSVVDENKVAIGAAGAIQPLINLLQDGTPRGKKDAA
TAIFNLCIYQGNKVRAVRAGIVTPLMRLLEDASHGMMDEALAILAILASHHEGKMAIAEA
DPMPVLVEVIRTGSARNRENGSAVLWSLCAGDVRSLKMMKELGAEEVLKELSENGTDRAK
RKAGSVLELLQRVESVETVIGS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccaagaagggggagatttggtgactcagcttgttgacttggtcaaggaaatc
tcagggttacctgactgcagaaacgctgtaaggaagatgtacggaaatttgatgaggaga
gtgaagcttttgagccctttgtttgaggaactcaaagataatgaaccacaacttgatgat
ggtgatcgtaaaggcctgcaggctttgagaaatgctttgaatttggctttggaactcctc
aaattagtcaatgatggcagtaagatttttcaggcgctgcaatttgacaaaactgcaggc
aagtttcatgttgtaacgacacagattgaagaggcactgagccaaattcattatgataga
ttcaatttgtctgaggaagttcatgaacagataaaacttgtgcacgggcaatttagaaga
gcgaaagggcgaatggattcacctgatttgcagcttcagagagatttggctatggtgagc
aagggaaatgatcctgatcctgaaacagtcaaaagactatctgaaaagttgtatcttaca
atggttaatgatctaaagagggaatcgattgcaattcatgatatggctatattaagtggt
ggagatcctgaagaacgctttgagatgatgtcgtttcttctcaagaaaatcaaggatctt
gtgatgttgggaaatcccgaagttgatacatcggatggggaaaagagtatgaagcatcga
tctcctgttattccagatgattttcggtgcccgatatctcttgaattgatgaaagatcca
gtgattgtgtcaactgggcagacgtatgagagatcatctattcaaaaatggcttgatgcc
ggacacaaaatgtgtccgaaaactcagcagacgttactacacacagcattgactccaaac
tatgtcttgaagagtctaattgctttgtggtgcgatagcaacggtgttgagctaccaaaa
tctgacaacaaaccgagacggaccggttcggagtgtgatcggacggtgatcggctcgtta
ctccagaagcttgtgatcggggactcggatgagcaaagatcagctgctggtgagcttcga
ttgttagcaaaaagaaatgctgataacagagtatgcattgctgaggctggtgctattcca
ctcttggtggaactactatcgtctcatgatggtaggactcaagaacacgcggttacagcc
cttttaaacttgtcgataaacgaggcaaacaaaggcattattgtgagcgttggagctata
cctgatatcgtagatgttttaaagaacggaagtacagaagctcgagaaaatgcagccgcc
actcttttcagcttgtcggttgtggatgaaaacaaagtcgctatcggagccgccggtgca
atacagcctcttatcaatttgcttcaagatgggactcctcgagggaaaaaagacgctgct
accgcgatttttaacctctgtatctatcaaggaaacaaggttcgggcagtaagggcaggg
atcgtgacaccattgatgagattgcttgaagatgctagccatgggatgatggacgaggcg
ttggctattttggctatacttgctagtcaccatgaagggaagatggctattgctgaagct
gacccaatgccagttttggtggaggtgatacgaacggggtcagcccggaaccgagagaac
ggttctgcggttttgtggtctttatgtgcaggtgatgttcgttctttaaagatgatgaaa
gaacttggagcagaagaagtgttgaaggaattgtctgagaatggaactgatcgagcgaag
agaaaagctgggagtgtattggaactactccaacgagtagaatctgttgaaaccgtgatt
ggttcttga
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