Cynara cardunculus var. scolymus (artichoke): 112523350
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Entry
112523350 CDS
T05604
Name
(RefSeq) putative methyltransferase NSUN6
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112523350
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
112523350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
FtsJ
RsmF-B_ferredox
Methyltransf_25
Barwin
NSUN5_fdxn-like
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
112523350
NCBI-ProteinID:
XP_024988682
LinkDB
All DBs
Position
LG 12:complement(4197570..4210279)
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AA seq
648 aa
AA seq
DB search
MKRKGGRVLLQVISRRNTSFSSTLTTLSQSQVLLMDPSERYCYNPTLRWNPQVEEHFNKA
YGAEAFARISKALTQPSRYSCIRVNTLRTTTDAVIEKIMEIQCDKRLHDPPQNLHMNDDV
ESLTGHKHNGVRDVGPAVEIPENGHSSSTETSAVIKCQIPGLDYVVFVKGSGPHDIQYDY
QQDRPPKEVIVSRKCAEAVLRGAQVYVPGILACSAHVEEGDVVAVSVGVEQPGRDGGWSV
GITRGIVLQGLQTDPHYLERDRLYIGQGITTMSRAGIFRGLTGLGVDMTDRVFRLGSFND
VLKGDIFLQNLPSIITAHVLDPQEGERILDMCAAPGGKTTAIASLMKDKAAVIAVDRSHN
KVMEIQNLAAELGLKSIIAYKLDALKSVNKNNLNGITTQGSREDRVGLTCQEAESGSSVT
GDLSSLATEGTKTDMTDNKILHVVSPVDTLPISEKANVPDEEQMNGGRYRSKAELRKENR
RMKNGPGRNQSTGGRVDKCEGFPPNSFDRVLLDAPCSALGLRPRLFAGEETIESLRRHAV
YQKRMFDQAVQLVRPGGVIVYSTCTINPSENESLVRYALDTYKFLSLAQQHPKIGRPGLL
GRCESSDGYFEEWLRPGEEDLVQRFDPSGPHDTIGFFIAKFNVAPKDA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaagggagggagggttctgcttcaagtcattagcagaagaaacacgagcttc
agcagcaccctaacaacactctctcagtcgcaggttctgttgatggatccatctgagcgt
tactgctacaatccaaccttgcgttggaatcctcaagtggaagagcatttcaacaaagct
tatggagcagaagcttttgctcgcatctccaaagcactaacacaaccctctcgttactct
tgtatacgtgtaaatacactgcgaacaacaactgatgctgttattgagaagattatggaa
attcaatgtgataaaaggctgcatgaccctccacagaatctgcatatgaatgatgatgta
gaatccctaactggtcataagcataatggtgttcgggacgttggtccagcagttgaaatc
cctgaaaatggtcacagttccagcacagaaactagcgctgttataaaatgtcagatacct
gggctagactatgttgtatttgtgaaaggttcaggtccacatgatattcagtatgattat
caacaagacaggcctcccaaagaggtaattgtcagccgtaagtgtgcagaggcagttctt
cgaggtgctcaggtatatgtgccaggtatattagcatgcagtgctcatgttgaggaaggg
gatgttgttgcagtttcagttggtgttgagcagcctggtcgtgatggtggatggagtgtt
ggaatcacacgtgggattgtcctacaaggactacagacagatcctcattatctcgaacga
gatcgcttatatattggccaaggaattacaacgatgtcaagggccggaatatttcgggga
ttgacaggtcttggtgtggatatgactgatagagtgtttagattgggatctttcaatgat
gtgctgaagggggatatatttcttcaaaatctgccaagcattattactgcgcatgtctta
gatccacaagagggagaaagaatattggatatgtgtgctgctcctggtggaaaaacaact
gcaattgcttcccttatgaaggataaagcagcagtgattgcagttgataggtctcataat
aaggtgatggagattcagaatctggctgcagaactggggttgaaaagcataatagcttat
aagctagatgcccttaaatctgttaacaagaataatttgaatggaataactacacaaggt
tctagggaagatagagtgggtctaacctgtcaagaggcagagtcgggtagttctgttact
ggagatttatcatctcttgcaacagaaggaacgaagacagatatgacagacaacaagatt
ttgcatgttgtttctcctgtagatacattacccatttcagagaaagctaatgttccagat
gaagaacaaatgaatggaggtcgttacagaagtaaagctgagctaaggaaagaaaatcga
agaatgaaaaatgggcctgggagaaaccaatcaacaggtggcagggtggataaatgtgaa
gggtttcctccaaacagttttgaccgagttcttcttgatgctccctgttctgctcttgga
ttgagaccacgcttatttgctggagaggaaacgatagaatcgttgagaagacatgcagtg
tatcagaaacgaatgttcgatcaggctgttcagctagttcgacctggtggagttattgta
tattccacatgcacgataaatccatccgagaatgagtccctggttcgttatgctttggac
acgtacaagtttctctcgttggcacaacagcatccaaaaattggcagacctggcctgctc
ggtcggtgtgaatcatctgatggatattttgaggaatggctaagacctggtgaggaagat
cttgtccagaggtttgatccttccggcccacatgatacaatcgggtttttcatagccaaa
ttcaacgttgcccccaaagatgcctag
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