Cynara cardunculus var. scolymus (artichoke): 112523638
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Entry
112523638 CDS
T05604
Name
(RefSeq) heat stress transcription factor A-4a-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112523638
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
112523638
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
112523638
NCBI-ProteinID:
XP_024989082
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Position
LG_12
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AA seq
378 aa
AA seq
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MNDAQTSSSSLPPFISKTYEMVDDPSTDSIVSWSQSNKSFIVWNPPEFSGELLPRFFKHN
NFSSFIRQLNTYGFRKIDPELWEFANEDFIRGQPHLLKNIHRRKPVHSHSIQNLSSNGAY
SNSSSPLTESEKLRYREKIDELHYEKELLSIEFHRHQQDQDRIKLEARALTDRLKHTGKV
QKDILCSLDEILQKPALDLKFETQFAETNDRKRRVSGETNNDQVCPFDLPIRETLTAESL
LALDTELVEHLESSLTLWEGILKEVDEAFEQQKWRLELDDEAACCADSPEICYSPMNIEI
GGGEIDMNSGATEEEKDGNVVGVNDVFWEQFLTENPGGSNVVEGDSKGLDEYGKFWWKMK
SVNNLADQLGQLTPAERT
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgctcagactagctccagttctctgcctccattcatctcgaagacgtatgag
atggtggatgatccttccacagattctatcgtctcctggagtcagagtaacaagagcttc
atcgtttggaatccacctgaattctcaggtgaattgctaccaagattcttcaagcataac
aatttctccagttttatcagacaacttaatacttacggttttcgaaaaatcgatcctgaa
ctgtgggagtttgcaaatgaggatttcatcagaggccaaccacacctcttgaagaacatt
catagaagaaagccggttcacagtcattcgattcagaatctttcaagcaatggggcttat
tcgaattcatcttctccactgactgaatcagagaaacttagatacagagaaaagatcgat
gagctacattacgagaaagaattactttcaatagagtttcacaggcaccagcaagatcaa
gatcgaatcaaattggaagcacgagccttaaccgatcgtttgaaacacactggcaaagtc
caaaaagatatcctctgttccttagatgaaatcttgcagaaaccagctcttgacttaaaa
ttcgaaactcaatttgcagaaacaaatgatagaaaaaggagggtgtcgggtgaaactaat
aatgatcaggtttgtccttttgatctcccgatccgcgagacactaactgctgaatccctt
ttggcattagacacagaattggttgagcatttggaatcttccctcacgttgtgggagggt
atattgaaagaggttgatgaagcttttgagcaacaaaaatggcgattagagttggatgat
gaggccgcatgttgtgccgatagcccagagatctgttattcaccgatgaacattgaaata
ggtggtggtgagattgacatgaattccggtgcaacggaagaagagaaagatgggaatgtt
gtgggtgttaatgatgtgttctgggaacaattcttgactgagaatccaggtggttcgaac
gtggtggagggtgatagcaaaggattggatgaatacgggaagttctggtggaaaatgaag
agtgtaaataatcttgccgatcagctagggcagcttactccggcggagagaacatga
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