Cynara cardunculus var. scolymus (artichoke): 112523737
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Entry
112523737 CDS
T05604
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112523737
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112523737
04147 Exosome [BR:
ccav04147
]
112523737
04090 CD molecules [BR:
ccav04090
]
112523737
Enzymes [BR:
ccav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112523737
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112523737
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112523737
CD molecules [BR:
ccav04090
]
Proteins
112523737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_5
AAA_30
nSTAND1
DUF87
AAA_15
AAA_25
APS_kinase
DUF815
Rad17
Motif
Other DBs
NCBI-GeneID:
112523737
NCBI-ProteinID:
XP_024989185
LinkDB
All DBs
Position
LG 1:complement(8383182..8389426)
Genome browser
AA seq
1350 aa
AA seq
DB search
MPSQESQEEIKRDTEQWRWSEMQGLELVSENPNPNPNLNPPFSSDPHTEEDREAQKTRLG
MEAEGQNSKIDGGGEKEKKKEEKGSSNPAVGFGELFRFADGLDYVLMGIGTIGAFVHGCS
LPIFLRFFADLVNSFGSNANNIDKMSQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGER
QSTKMRIKYLEAALSQDIQFFDTEVRTSDVVFAINTDAVNVQDAISEKLGNFIHYMATFV
SGFLVGFTAVWQLALVTLAVVPLIAVIGGIHTTTLSKLSSKSQEALSEAGNIAEQTIVQI
RTVLAYVGESRALQAYSSALKISQKLGYKSGFSKGFGLGATYFTVFCCYALLLWYGGYLV
RHHHTNGGLAIATMFSVMIGGLALGQSAPSMSAFAKARVAAAKIFRIIDHKPSIDRNGEA
GLELDSVSGLVELKNVTFSYPSRPDVKILNNFTLSVPAGKTIALVGSSGSGKSTVVSLIE
RFYDPTSGQVMLDGHDIKGLKLRWLRQQIGLVSQEPALFATTIQENILLGRPDASMVEIE
EAARVSNAHSFIIKLPDAYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSAL
DSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVVVLQQGGVLEMGTHDDLIAKGEN
GTYAKLIKMQEVAHETAMNNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFST
SDFSLSLEGGYPSYRHEKLPFKEQASSFWRLAKMNSPEWTYALIGSVGSVVCGSLSAFFA
YVLSAVLSVYYNQDHAYMIREIGKYCYLLIGVSSAALIFNTLQHFFWDVVGENLTKRVRE
KMLAAVLKNEMAWFDQEENESSRIAARLSLDANNVRSAIGDRISVIMQNSALMLVACTAG
FVLQWRLALVLVAVFPLVVAATVLQKMFMQGFSGDLEGAHAKATQLAGEAVANMRTVAAF
NSEAKIVNLFTLSLQKPLRRCFWKGQIAGSGFGVAQFLLYASYAVGLWYASWLVKHGISD
FSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMKSVFDLLDRKTEIEPDELDAIPVPD
RLRGEVELKHIDFSYPSRPDIPVFRDICLRARAGKTLALVGPSGCGKSSVIALIQRFYEP
SSGRVIIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHESATEAEITEAATL
ANAHKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFLRKAEVMLLDEATSALDAESE
KCIQEALERICSGKTTVVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNHPDGCYAK
MIQLQRFSHGEAANMVSGGSGSSSKRHIEG
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgccatcacaagaatcccaagaggagataaagagagacacagagcagtggagatggtct
gaaatgcaaggtcttgaacttgtatctgaaaacccaaatccaaatccaaatctaaatcca
ccattcagctcagacccacacactgaagaagacagagaagctcaaaagacaagattggga
atggaagctgaggggcaaaatagtaaaatcgatggtggaggagagaaagagaagaagaag
gaggagaaaggcagcagtaatccggcagttgggtttggagagttgtttagatttgcagat
ggattagattacgtattgatgggaattggaacaattggtgcttttgttcatggctgttct
ttgcctattttcctcagattttttgctgatcttgttaattcatttggttccaatgccaat
aacattgataaaatgtctcaagaagtcttaaagtatgcattctactttcttgtggttgga
gctgcaatatgggcatcttcatgggcagagatatcatgttggatgtggacaggagagagg
caatcaacaaaaatgaggatcaaatacttagaagcagcactgagccaagacattcagttc
tttgacactgaagtcagaacttcagatgttgtctttgctatcaacacagatgctgttaat
gtccaagatgccattagtgagaagctggggaattttatacactatatggcaacatttgtg
tctggatttttggtgggatttacagcagtttggcaattggcactggtaacactagctgtg
gtgcctttaattgcagtaattggaggtattcacaccaccacattatccaaactttcttct
aaaagtcaagaagctctttcagaagctggaaacattgctgagcagacgattgtacaaatt
cggaccgttttggcatatgtgggtgaatcaagagcattacaagcctattcttccgcatta
aagatctcacaaaaacttggatacaaaagtggattttctaaaggatttggattaggagca
acatatttcaccgtcttttgttgctacgcacttcttctatggtatggaggctatcttgtt
cgccaccatcacaccaatggcggactagccattgccaccatgttctccgtcatgattggt
ggattagctttagggcaatctgccccaagtatgtctgcatttgcaaaagcccgagtagct
gcagcgaaaatctttcgaattatcgatcacaaaccaagcatagacagaaatggtgaagcg
ggtttggagttagactcagtttcggggcttgtggaactcaaaaatgtcaccttttcatac
ccttcaagaccagatgttaaaattctcaataattttactttaagtgttcctgctggaaaa
accattgctctggtcggaagcagtggctctgggaaaagcacagtggtttccctcattgaa
agattttatgatcccacttcaggacaagtaatgcttgatgggcatgacattaaaggactg
aaattgagatggttaaggcaacagattgggttggttagccaagagccagcactgtttgct
acaaccattcaagaaaacatacttttgggtcgacccgacgcatccatggtcgagatcgag
gaagcggctcgtgtttccaatgctcattcattcatcatcaaattacccgatgcctacgat
actcaggtaggggaaagggggttacaactttccggtgggcagaagcagagaatagccata
gcgagggcgatgctgaagaatccggcgatcttgcttttggatgaggcgacgagtgctttg
gattctgaatctgagaagctggttcaagaggctttggatcggttcatgatcgggaggacg
actctggtgatcgcccaccgtctctccaccattcggaaggcggatctagtggtggttctg
cagcagggcggtgttttggaaatgggaactcacgatgatcttatcgcaaagggcgaaaac
ggtacctacgccaagctcattaagatgcaagaagttgcccatgaaaccgccatgaataat
gccagaaagagtagtgccaggccttcaagtgcgaggaattcagtgagttcaccgataatc
actcggaactcgtcttacggccgatcgccatactcaaggcggttatcggatttctcgaca
tcggacttcagtctgtcgcttgaaggtggataccctagttaccgtcacgaaaagcttccg
tttaaggagcaagcaagttccttttggcggcttgcgaaaatgaactcgcctgaatggacg
tatgctttgattggctctgtaggatcggtggtttgtgggtcgctcagcgcgtttttcgct
tatgttcttagtgcggttctcagtgtgtactacaaccaagaccatgcctacatgatcaga
gaaatcgggaaatattgttatctgttgatcggggtctcatcggctgcgctcattttcaac
actttgcagcactttttctgggatgtggtgggagaaaacttgaccaaacgggttcgagag
aaaatgctggcggcagttttgaagaatgagatggcatggttcgatcaggaggagaatgag
agctcgagaattgcagctcggttgtctctagatgctaataatgttcggtcagcgattggg
gatcggatttcggtgattatgcagaactccgccctcatgttggtggcctgcacagccggt
tttgttctacagtggcggttggcgcttgttcttgtcgctgttttcccgttggtggttgca
gccactgttttgcagaaaatgttcatgcaaggattttccggcgacttggaaggtgctcat
gcaaaagcgacacagttagcaggggaggccgtggccaatatgagaacggtggccgctttc
aactcggaggcaaagatcgtgaacctttttacgttgagtctccagaagccgcttcgtaga
tgcttctggaagggtcagatcgctgggagcgggttcggggtggctcaatttttgctctat
gcttcatatgccgttggactttggtatgcttcatggctagttaagcacggtatctccgac
ttctcgaagacgattcgggtgttcatggttctcatggtctcagcaaatggtgcagccgag
accctaactcttgctcccgatttcatcaagggcggccgagcaatgaagtcggtgttcgat
cttcttgaccggaaaaccgagatcgagcccgatgagctcgacgcgattcctgtccctgac
cgtctccgcggtgaagtggaactcaagcacatcgacttttcttacccgtctcgtcctgac
atcccggttttccgtgacatctgtctacgagctcgagccggaaagactcttgccctggtg
ggcccaagcggttgcgggaaaagctcggtgatcgcactgatacaaagattctatgagcca
tcatccggacgtgtgataatcgatggaaaagatatccggaaatacaacctaaagtcacta
cgccgccacatcgccgtggtcccacaagaaccgtgcctcttcgccaccacaatctatgaa
aacatcgcgtacggacacgagtcggcaaccgaggccgagatcacggaagccgccaccctc
gcaaacgctcacaagttcatatcctcattaccagacggatacaaaacgttcgtaggggaa
agaggcgtgcagctctccggagggcaaaaacaacgtgtggccatcgcaagggcgtttttg
agaaaagccgaggtgatgctactagacgaagccacaagtgcacttgacgcagagtcggag
aagtgcattcaagaggctctcgagcgtatctgctcggggaaaacgacggttgtcgttgca
cataggctatcgacgatacgcaatgctcatgtgattgcggtgatcgatgacgggaaggtg
gccgaacaaggatcacattcgcatctgttgaagaaccacccggatgggtgttacgcaaaa
atgatacagttgcaaagattctcacacggcgaggccgcaaatatggtgtcggggggttcg
ggttcgagttctaaacgtcatatagaagggtaa
DBGET
integrated database retrieval system
