Cynara cardunculus var. scolymus (artichoke): 112523916
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Entry
112523916 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112523916
KO
K08912
light-harvesting complex II chlorophyll a/b binding protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00196
Photosynthesis - antenna proteins
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
112523916
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
ccav00194
]
112523916
Photosynthesis proteins [BR:
ccav00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
112523916
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GFIT
Motif
Pfam:
Chloroa_b-bind
PhosphMutase
Motif
Other DBs
NCBI-GeneID:
112523916
NCBI-ProteinID:
XP_024989356
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All DBs
Position
LG 12:38617887..38621548
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AA seq
558 aa
AA seq
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MAASTMALSSSFTGQAVKSVLFAPGVAGNGRVSMRKTAGKAAPSSSPWYGPDRVKYLGPF
SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAIEGYRVAGGPL
GEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
LADHLADPVSNNAWAYATNFVPGNLRNSSNQHNKPLILLHLFLPSSVLLVSTSMAASTIA
PSSTPFFGRVVKSIPPALGIAGNGTVSMRKTTTKAAPSSSPWYGPDRVKYLGPFSGEAPS
YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE
AVWFKAGAQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAIEGYRVAGGPLGEVNDP
LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA
DPVSNNAWAYATNFVPGK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcaacaatggccctctcctcctctttcacgggacaggcggtcaaatccgtt
ctgtttgcacctggggtcgccggaaatggaagggtctccatgaggaaaaccgctggaaaa
gctgccccgtctagcagcccatggtacggtccagacagagtcaagtacctgggtccattc
tccggtgaggctccttcatacctgaccggtgagttccctggtgactatggctgggacact
gccggtctatctgcggaccctgaaacctttgctaagaaccgtgagctcgaggtgatccac
tgcagatgggctatgcttggagctcttgggtgcgtgttccccgagctcttagcccgcaat
ggtgtcaagttcggtgaagccgtatggttcaaggctggagcacagatctttagtgaagga
ggacttgactacttgggtaacccaagcttggttcatgcacaaagcatattagccatttgg
gctacacaagtgatcttgatgggtgcgattgaggggtacagagtggcgggtgggccactt
ggggaggtggtggacccactttaccccggaggaagctttgatccattgggacttgcagat
gacccagaggcctttgctgagctgaaggtgaaggagatcaagaatggtagactcgccatg
ttctcgatgtttgggtttttcgtacaagctattgtgaccgggaaaggtccattggagaac
ctcgctgaccatcttgctgaccccgtcagcaacaacgcttgggcttatgccacaaacttt
gttcctggaaacctaagaaactcaagcaaccaacacaataagcctttgattctactacac
ttgtttcttccatctagtgtgctcctagtttcgacttctatggctgcttcaacaatcgct
ccctcttccacgcctttctttgggagggtggtgaaatccattcccccagcattgggaatt
gctggtaatggaacagtctccatgaggaaaaccaccacaaaagctgcgccatcaagcagc
ccatggtacggcccagacagagttaagtacttgggtccattctccggtgaggctccttca
tacctcactggtgaattccctggtgattatggctgggatactgctggtctatctgcagac
cctgaaaccttcgctaagaaccgtgagcttgaggtaattcactgcagatgggctatgctt
ggagctctagggtgtgtattccccgagctcttagctcgcaatggtgtcaagtttggggag
gcagtctggttcaaagctggagcacaaatattcagtgacggcgggcttgactacttgggt
aatccaagcttggtccatgcacaaagcatcttggccatttgggccacccaggtaatccta
atgggtgcaattgaggggtaccgagttgctggtgggccacttggtgaggtgaatgaccct
ctttaccctggtgggagctttgacccgttgggacttgctgatgatcctgaagcttttgct
gagttgaaggtcaaagagatcaagaatggcagactcgctatgttttcaatgtttggattc
tttgtacaagccattgtgaccggaaagggtccattggaaaaccttgctgaccaccttgca
gatcccgtaagcaacaacgcttgggcctatgctactaactttgtacctggaaaatga
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