Cynara cardunculus var. scolymus (artichoke): 112523935
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Entry
112523935 CDS
T05604
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1-like
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112523935
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
112523935
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
112523935
NCBI-ProteinID:
XP_024989378
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All DBs
Position
LG 12:complement(38426227..38429780)
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AA seq
678 aa
AA seq
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MMGYAHNNTKIKLEQEPVELEQFVQASPGLKKSNVSLDQSFIEVEDFPDAYLDSILSFDD
WVEDHPNLLVAEVMNSEENSSLEKSLEFKTEKEEVCDSGKLGDLGSLIQEGMGRVRLTSG
ADVIDCVGSSEVTAGDEISMRNDWKQETQEVVSDGVESGEVKNVNENEAKNDTEKGGDNK
DELVGGELEESEDSEEESSSSSSSSSSSSDDEEEEEEEEEEEEEEESDDDDDDSDEEEDT
KEIKKVKGEVEMEEGEIRDFEVEEVVAWSDDEDGDAVKGPIRSKNEVQQLPPVPPVNVTI
EPHHQTLPVGVVLSIMGAQVIVEGVENHNPLSEGSILWITESRSPLGVVDEIFGPVKNPY
YMVRYNSETEVPTEIQQGSLISFVPEFADYVLNNNNLYKKGYDASGENDEELDDEIEFSD
DEKEAEYKKMLKMSKRGSTEQKNGNMKKDKKSRNRVGNWKNDHQASPTSQVNSFAGRPPT
SGPGVSPAFSPGPPAPNLTGPSGVWPNGFPAIQPQNVGFPPNSFSPNGLPPNVPFMQQNF
NQQSFQNLGLPNLAPFYPQFNTNGQMFPSNFGQGVPQNFGANPAFTSWPAGMPQNSFNQP
QVGPPMAFQGLPFNPSVNVQQSMNVQHPQGVAMPNRPQMENISMRPPMANGFPNRGGRKP
FQRGGGRFRGGRSGQQSR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgatgggttatgcacataataacaccaagatcaaactagagcaagaaccggtcgaacta
gaacagttcgttcaagcttcgcctggcctcaagaaatccaacgtctcccttgatcaatct
ttcatagaggtcgaagattttcccgacgcttacctcgattctatcctaagttttgacgat
tgggttgaagaccatccaaatttacttgtcgctgaagtcatgaactcagaagagaactct
agtttggagaagtctttggaatttaaaacggaaaaagaagaggtttgtgattctgggaaa
ttaggggatttgggttctttgattcaggaaggaatgggtagagttcgtttaacatcgggt
gctgatgtgattgattgcgtaggaagtagtgaggttactgcgggtgatgaaatcagcatg
aggaatgattggaagcaggagacgcaggaggttgtgagtgatggagttgagagtggtgag
gttaagaatgtcaatgagaatgaagcaaaaaatgatactgagaaaggtggggataacaaa
gatgaattggttggtggtgagttggaggagtctgaggattccgaggaggaatcatcatct
tcatcatcttctagtagcagtagtagtgatgatgaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaaagtgatgatgatgatgatgatagtgatgaagaagaggataca
aaggagataaagaaggtgaaaggtgaggtggaaatggaagaaggtgagataagagatttt
gaggttgaggaagtggttgcttggagtgatgatgaagatggtgatgctgtaaaaggacca
attaggtccaagaatgaggttcagcaactccctcctgttcctccagtgaatgtaaccata
gaaccacatcatcagacacttccagttggagttgtattatcgattatgggtgcacaagtt
attgtggaaggagtggagaatcataaccctctaagtgagggttccattttgtggatcaca
gaaagcagatcaccactaggagtagtggatgaaatatttggacctgtaaagaatccttac
tacatggtacgctacaactccgagactgaggtccctactgagatccaacaaggcagtttg
atctcttttgttcccgaatttgcagattacgttctaaataataacaatctttacaagaaa
ggatacgatgcatccggtgaaaatgatgaagagttggatgatgaaatagagttttcagat
gatgagaaggaggccgagtacaagaaaatgttgaaaatgtcaaaaaggggatcaactgaa
cagaaaaatgggaatatgaaaaaggataagaagtcgagaaatcgggttggaaactggaaa
aatgatcaccaggcttcccctacctcacaagtaaatagttttgctggtagaccccccacc
agtggacctggggttagtccagccttttcacctggtccaccggcacctaacctcactggg
ccttctggtgtttggccaaacgggtttccagcaattcagccacagaatgtgggctttcct
ccaaacagtttttctcctaatgggctccctcctaatgtaccatttatgcaacagaacttt
aatcagcaatcatttcagaatcttggtttgccaaatttagcacccttttatccacagttc
aacactaatgggcagatgtttccttctaattttggtcaaggtgttccccaaaattttggt
gcaaatcctgcatttacatcttggcctgcaggtatgcctcagaatagctttaatcaacca
caagttgggccaccaatggcattccaaggcttgcctttcaatccttccgtgaatgttcaa
caatccatgaatgttcaacatccgcaaggagttgcaatgcctaaccggcctcaaatggaa
aacattagtatgaggcctccgatggctaatggatttccaaatcgtggaggaagaaagcca
tttcaaaggggcggtggccgttttagaggtggcagaagtggacagcaatccaggtga
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