Cynara cardunculus var. scolymus (artichoke): 112524100
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Entry
112524100 CDS
T05604
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112524100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112524100
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
112524100
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112524100
Prokaryotic type
112524100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
112524100
NCBI-ProteinID:
XP_024989514
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All DBs
Position
LG 13:6984712..6990709
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AA seq
365 aa
AA seq
DB search
MRSCINHRSAPFFTFPAIILHKIPVFLVKSTHNMASSKAITDFFPPAKRSKAASSFEPSL
KRNFLDVPQKPTTDAVPSSLPESIQDDEPTTVQTSPSSTLTAEQKLKVQFNQSLAKAKRN
LRICAERVSNSTSGEGLRFLKLQELLVEETWLEALPGEFQKPYAKKLSEFIESEIQGPIP
IYPPQHLIFNALNSTPFDKIKAVIIGQDPYHGPGQAMGLSFSVPQGIKVPSSLVNIYKEL
HQDLNCSIPSHGNLERWAIQGVLLLNAVLTVRQHQANSHAKKGWEQFTDSVIETISKKNK
GIVFLLWGNYAQAKSRLIDETKHHILKAAHPSGLSAHRGFFGCRHFSRVNRILEEATTPP
INWQL
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcctgcatcaatcatcgctccgcgcctttcttcacatttcccgccataatactc
cacaaaatacctgtgttcttggtaaaatctacccacaatatggcttcctctaaagccata
actgatttcttcccacctgcaaagcgctccaaagcagcttcatccttcgaaccttcctta
aaaagaaacttcctcgacgttccccaaaaacccaccaccgacgccgttccatcttcccta
ccggagtcgattcaggatgatgaacccaccacagttcagacttcaccttcttcgactctc
actgcggaacagaaattgaaggttcaattcaatcaatcactggccaaagccaaacgtaat
ctcagaatttgtgcggagagggtttcgaactccacttctggtgaggggttgagatttttg
aaactacaagaactgttggtggaagaaacatggttggaagccctccctggggagtttcag
aagccctatgccaagaaattgagtgaattcatagagagtgaaatacaaggccccatacca
atctacccacctcagcatttgatcttcaacgcactgaattctaccccatttgacaaaatc
aaagctgtcatcatcggtcaggacccatatcatggacctggtcaagctatgggcctctct
ttctctgttccacaaggaataaaagtaccttcaagtttggtgaacatatacaaggaactt
catcaggacttgaattgttcaataccatctcatgggaatttggaacgatgggctatacag
ggtgtcctgttgctcaatgccgttcttactgttaggcagcatcaggcaaattctcatgca
aagaaagggtgggaacaattcactgattccgtgattgagacaatctctaaaaagaacaaa
gggattgttttccttctttggggaaactatgcccaagcaaaatcgaggttaattgatgaa
acgaagcatcatattctcaaggcagcacatccttctggcttatctgcccataggggattc
ttcggatgcaggcatttttctcgtgtcaaccggatcttggaggaagcaaccactcctccg
atcaattggcaactctaa
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